JMakeHDE.sh

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#!/usr/bin/env zsh
#
# \author jseneca
#
version=1.0
script=${0##*/}
 
# ------------------------------------------------------------------------------------------
#
#            Utility script to create histogram of particle light pattern
#
# ------------------------------------------------------------------------------------------
 
INPUT_FILE="J-11_11_22s_example.HDE";
 
while getopts f:h option
do      case "$option" in
        f) INPUT_FILE="$OPTARG";;
        h) exit;;
    esac
done;
 
if [ -z $INPUT_FILE ]; then
    echo "Please pass data file."
    exit
fi
 
if [ -z $JPP_DIR ]; then
    echo "Variable JPP_DIR undefined."
    exit
fi
 
OUTPUT_FILE=""
PARTICLES_RE="J[-_[:digit:]]*?s"
if [[ $INPUT_FILE =~ $PARTICLES_RE ]]
then        
    OUTPUT_FILE="${MATCH}"
fi
 
OUTPUT_FILE="${OUTPUT_FILE}.dat"
 
source $JPP_DIR/setenv.sh $JPP_DIR
 
JMakeHDE \
    -f $INPUT_FILE     \
    -o $OUTPUT_FILE