JMonitorPMT.sh

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#!/bin/zsh

#####################################################
# Script to run the ToT - K40 PMT calibration chain.# 
#####################################################

version=1.0
script=${0##*/}

source $JPP_DIR/setenv.sh $JPP_DIR >& /dev/null

if ( do_usage $* ); then
    usage "$script <input_file> <detector_file> [output_path [selection]]"
fi

set_variable       OUTPUT_DIR              ./
set_variable       SELECTOR                JDAQTimesliceL1
set_variable       DEBUG                   0

case $# in
    5)     set_variable    DEBUG           $5;&
    4)  set_variable       SELECTOR        $4;&
    3)     set_variable    OUTPUT_DIR      $3;&
    2)     set_variable    DETECTOR_FILE   $2
        set_variable       DAQ_FILE        $1;;    
    *)     fatal "Wrong number of arguments"
esac

if [ ! -d ${OUTPUT_DIR} ]; then     
    mkdir -p ${OUTPUT_DIR} 
fi

set_variable       OUTPUT_JC_TOT           ${OUTPUT_DIR}/$(basename $DAQ_FILE .root)_JC_TOT.root
set_variable       OUTPUT_JMC_TOT          ${OUTPUT_DIR}/$(basename $DAQ_FILE .root)_JMC_TOT.root
set_variable       OUTPUT_JFIT_TOT         ${OUTPUT_DIR}/$(basename $DAQ_FILE .root)_JFIT_TOT.root
set_variable       OUTPUT_JC_K40           ${OUTPUT_DIR}/$(basename $DAQ_FILE .root)_JC_K40.root
set_variable       OUTPUT_JMC_K40          ${OUTPUT_DIR}/$(basename $DAQ_FILE .root)_JMC_K40.root
set_variable       OUTPUT_JFIT_K40         ${OUTPUT_DIR}/$(basename $DAQ_FILE .root)_JFIT_K40.root
set_variable       PMT_PARAMETERS_FILE     ${OUTPUT_DIR}/$(basename $DAQ_FILE .root)_TOT_K40.txt
set_variable       K40_DETECTOR            ${OUTPUT_DIR}/$(basename $DETECTOR_FILE .detx)_K40.detx

cp $DETECTOR_FILE $K40_DETECTOR

JCalibrateToT                \
    -f $DAQ_FILE             \
    -a $K40_DETECTOR         \
    -C $SELECTOR             \
    -o $OUTPUT_JC_TOT        \
    -d $DEBUG
CHECK_EXIT_CODE

JMergeCalibrateToT           \
    -f $OUTPUT_JC_TOT        \
    -o $OUTPUT_JMC_TOT       \
    -d $DEBUG
CHECK_EXIT_CODE

JFitToT                      \
    -f $OUTPUT_JMC_TOT       \
    -a $K40_DETECTOR         \
    -P $PMT_PARAMETERS_FILE  \
    -o $OUTPUT_JFIT_TOT      \
    -w                       \
    -d $DEBUG
CHECK_EXIT_CODE

JCalibrateK40                \
    -f $DAQ_FILE             \
    -a $K40_DETECTOR         \
    -C $SELECTOR             \
    -o $OUTPUT_JC_K40        \
    -d $DEBUG
CHECK_EXIT_CODE

JMergeCalibrateK40           \
    -f $OUTPUT_JC_K40        \
    -o $OUTPUT_JMC_K40       \
    -d $DEBUG
CHECK_EXIT_CODE

JFitK40                     \
    -f $OUTPUT_JMC_K40      \
    -a $K40_DETECTOR        \
    -P $PMT_PARAMETERS_FILE \
    -o $OUTPUT_JFIT_K40     \
    -w                         \
    -A                      \
    -d $DEBUG
CHECK_EXIT_CODE