JCompress.sh

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#!/bin/zsh
script=${0##*/}

if [ -z $JPP_DIR ]; then
    echo "Variable JPP_DIR undefined."
    exit
fi

source $JPP_DIR/setenv.sh $JPP_DIR >& /dev/null

set_variable:  DEBUG    CALIBRATE_DEBUG  1
set_variable   WORKDIR  `pwd`            

if do_usage $*; then
    usage "$script (input file)+"
fi
    
for INPUT_FILE in $*; do

    set_variable  OUTPUT_FILE  $WORKDIR/${${INPUT_FILE##*/}/\.root/_convert.root}

    if [[ ! -f $OUTPUT_FILE ]]; then

        echo "Convert $INPUT_FILE to $OUTPUT_FILE."
        
        JConvert \
            -f $INPUT_FILE    \
            -o $OUTPUT_FILE   \
            -C -JDAQ\.\*      \
            -C +JDAQEvent     \
            -d $DEBUG   
    fi
done