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test-tuna.sh
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1 #!/bin/zsh
2 script=${0##*/}
3 
4 if [ -z $JPP_DIR ]; then
5  echo "Variable JPP_DIR undefined."
6  exit
7 fi
8 
9 source $JPP_DIR/setenv.sh $JPP_DIR >& /dev/null
10 
11 set_variable: DEBUG DATABASE_DEBUG 2
12 set_variable: WORKDIR DATABASE_WORKDIR /tmp/
13 set_variable: CANVAS DATABASE_CANVAS 1200x600
14 set_variable: TIMEAXIS DATABASE_TIMESAXIS %d:%m:%y%F1970-01-01 00:00:00
15 set_variable: GIF DATABASE_GIF gif
16 set_variable LOGBOOK "Individual Logbooks"
17 set_variable AUTHOR "deJong M"
18 set_variable FACET ELcode
19 
20 if do_usage $*; then
21  usage "$script <detector> <run> <parameters file> <user name> <password>"
22 fi
23 
24 case $# in
25  5) set_variable PASSWORD $5;
26  set_variable USERNAME $4;
27  set_variable PARAMETERS_FILE $3;
28  set_variable RUN $2;
29  set_variable DETECTOR $1;;
30  *) fatal "Wrong number of arguments."
31 esac
32 
33 typeset -Z 8 DETECTOR
34 typeset -Z 8 RUN
35 
36 set_variable DIR $WORKDIR/$DETECTOR/$RUN/
37 mkdir -p $DIR
38 
39 set_variable OUTPUT_FILE $DIR/tuna.root
40 
41 if [[ ! -f $OUTPUT_FILE ]]; then
42 
43  JTuna \
44  -D $DETECTOR \
45  -R "$RUN $RUN" \
46  -o $OUTPUT_FILE \
47  -G \
48  -d $DEBUG --!
49 else
50  notice "File $OUTPUT_FILE exists; remove to overwrite."
51 fi
52 
53 set_variable INPUT_FILE $OUTPUT_FILE
54 set_variable OUTPUT_FILE $DIR/test.root
55 
56 # create summary report
57 
58 echo "Test $DETECTOR $RUN" > $DIR/summary.txt
59 
60 JTestTuna \
61  -f $INPUT_FILE:\.\* \
62  -P $PARAMETERS_FILE \
63  -o $OUTPUT_FILE \
64  -F $FACET \
65  -d 0 >> $DIR/summary.txt
66 
67 # create graphics
68 
69 for QUANTITY in `JPrintResult -f ${OUTPUT_FILE}:\.\* -O "%s"`; do
70 
71  notice "Creating graphics ${DIR}/${QUANTITY}.${GIF}."
72 
73  set_variable quantity `echo $QUANTITY | sed 's/\[/\\\[/g;s/\]/\\\]/g'`
74 
75  JPlot1D \
76  -w "$CANVAS" \
77  -f "${OUTPUT_FILE}:${quantity}$" \
78  -T "?" \
79  -t "$TIMEAXIS" \
80  -o ${DIR}/${QUANTITY}.${GIF} \
81  -d $DEBUG -B
82 
83  ATTACHMENTS+=" -f ${DIR}/${QUANTITY}.${GIF}"
84 done
85 
86 # report to e-log
87 
88 echo \
89 elog \
90  -h elog.km3net.de \
91  -p 3000 \
92  -u $USERNAME $PASSWORD \
93  -l "$LOGBOOK" \
94  -a Subject="Auto" \
95  -a Type="Monitoring" \
96  -a Author="$AUTHOR" \
97  -n 0 -v \
98  -m $DIR/summary.txt \ $ATTACHMENTS
99 
100 CHECK_EXIT_CODE
101 
102 # cleanup
103 
104 rm -f $DIR/tuna.root
105 rm -f $DIR/test.root
106 rm -f $DIR/summary.txt
107 if [[ -n "$ATTACHMENTS" ]]; then
108  rm -f ${ATTACHMENTS//-f}
109 fi
110 
JTOOLS::w
data_type w[N+1][M+1]
Definition: JPolint.hh:741
f
then JMuonPostfit f
Definition: JMuonPostfit.sh:118
WORKDIR
then usage $script< detector file >< inputfile > nUtility script to create PDF and CDF of transition time distribution fi case set_variable WORKDIR
Definition: JLegolas.sh:31
INPUT_FILE
set_variable INPUT_FILE
Definition: JARCACalibrateMuon.sh:30
LOGBOOK
Definition: elogd.h:232
exit
exit
Definition: JPizza.sh:36
DIR
do echo Generating $dir eval DIR
Definition: JPlotNPE1D.sh:54
echo
then echo
Definition: JDOMDAQDriver.sh:56
PARAMETERS_FILE
&set_variable PARAMETERS_FILE
Definition: file-Tuna.sh:28
JTOOLS::n
const int n
Definition: JPolint.hh:660
set_variable
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR &dev null set_variable
Definition: JAcoustics.sh:20
T
do set_variable OUTPUT_DIRECTORY $WORKDIR T
Definition: JCalibrateHeight.sh:61
RUN
then rm i $OUTPUT_FILE fi let RUN
Definition: software/JDataWriter/JDataWriter.sh:103
o
do $DIR JTransitTime o
Definition: JTransitTime.sh:44
F
then awk F
Definition: getMIIseacurrent.sh:86
usage
* usage
Definition: JLigier-local.sh:34
USERNAME
set_variable USERNAME
Definition: test-tuna.sh:26
$INPUT_FILE
then JFileTuna f $INPUT_FILE
Definition: file-Tuna.sh:66
R
then usage $script[distance] fi case set_variable R
Definition: JDrawLED.sh:43
OUTPUT_FILE
&set_variable OUTPUT_FILE
Definition: JARCACalibrateMuon.sh:29
d
then JMuonMCEvt f $INPUT_FILE o $INTERMEDIATE_FILE d
Definition: JMuonPath.sh:47
a
then JCalibrateToT a
Definition: JTuneHV.sh:116
$DETECTOR
then set_variable MODULE getModule a $DETECTOR L $STRING $FLOOR JEditDetector a $DETECTOR M $MODULE add $X o $DETECTOR else echo No update of detector $DETECTOR
Definition: module-Z:fit.sh:118
DEBUG
then usage $script< input_file >< detector_file > fi set_variable OUTPUT_DIR set_variable SELECTOR JDAQTimesliceL1 set_variable DEBUG case set_variable DEBUG
Definition: JCalibratePMT.sh:21
$WORKDIR
then display $WORKDIR
Definition: plot-Domino.sh:128
Z
do set_variable MODULE getModule a $WORKDIR detector_a datx L $STRING JEditDetector a $WORKDIR detector_a datx M $MODULE setz o $WORKDIR detector_a datx JEditDetector a $WORKDIR detector_b datx M $MODULE setz o $WORKDIR detector_b datx done echo Output stored at $WORKDIR detector_a datx and $WORKDIR tripod_a txt JDrawDetector2D a $WORKDIR detector_a datx a $WORKDIR detector_b datx L BL o detector $FORMAT $BATCH JDrawDetector2D T $WORKDIR tripod_a txt T $WORKDIR tripod_b txt L BL o tripod $FORMAT $BATCH JCompareDetector a $WORKDIR detector_a datx b $WORKDIR detector_b datx o $WORKDIR abc root &dev null for KEY in X Y Z
Definition: JAlignDetector.sh:81
DETECTOR
set_variable DETECTOR
Definition: JARCACalibrateMuon.sh:31
JTOOLS::v
data_type v[N+1][M+1]
Definition: JPolint.hh:740
JTOOLS::u
double u[N+1]
Definition: JPolint.hh:739
in
then fatal Wrong number of arguments fi set_variable DETECTOR $argv[1] set_variable INPUT_FILE $argv[2] eval JPrintDetector a $DETECTOR O IDENTIFIER eval JPrintDetector a $DETECTOR O SUMMARY source JAcoustics sh $DETECTOR_ID CHECK_EXIT_CODE typeset A TRIPODS get_tripods $WORKDIR tripod txt TRIPODS for EMITTER in
Definition: JCanberra.sh:41
done
set_variable NUMBER_OF_ITERATIONS set_variable EPSILON cat acoustics_fit_parameters txt<< EOF $CONFIGURATION[*]Nmin=3;sigma_s=100.0e-6;stdev=10.0;mestimator=0;fixStrings=0;EOF for STRING in $STRINGS[*];do#fit stretching and(z) position of given string set_variable DETECTOR_TMP/tmp/detector_A.datx JEditDetector-a $DETECTOR-o $DETECTOR_TMP-r $STRING JEditDetector-a $DETECTOR-o $DETECTOR-k $STRING for MUL in 0.005 0.001;do DX_M=0.2 for((N=0;$N< $NUMBER_OF_ITERATIONS;++N));do CHI2[3]=$CHI2[1] fitPositionOfString $STRING Z $DX_M fitStretchingOfString $STRING $MUL if(($CHI2[3]-$CHI2[1]< $EPSILON));then break fi done if(($N >=$NUMBER_OF_ITERATIONS));then printf"warning: reached maximum number of iterations %d - converenge %7.3f\n"$N $(($CHI2[3]-$CHI2[1])) fi done JMergeDetector-a $DETECTOR-a $DETECTOR_TMP-o $DETECTOR rm-f $DETECTOR_TMP JConvertDetectorFormat-a $DETECTOR-o $DETECTOR-r-d 0 > &dev null done
Definition: acoustics-fit.sh:427
script
script
Definition: JAcoustics.sh:2
D
do echo Generating $dir eval D
Definition: JDrawLED.sh:53
PASSWORD
then usage $script< detector >< run >< parametersfile >< username >< password > fi case set_variable PASSWORD
Definition: test-tuna.sh:25
null
esac $JPP_BIN JLogger sh $LOGGER until pgrep JGetMessage</dev/null > dev null
Definition: examples/JLogger/JLogger.sh:33
P
then $DIR JPlotNPE PDG P
Definition: JPlotNPE-PDG.sh:62
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