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acoustics-Zmul.sh
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1 #!/bin/zsh
2 script=${0##*/}
3 
4 if [ -z $JPP_DIR ]; then
5  echo "Variable JPP_DIR undefined."
6  exit
7 fi
8 
9 source $JPP_DIR/setenv.sh $JPP_DIR >& /dev/null
10 
11 set_variable: DEBUG ACOUSTICS_DEBUG 2
12 set_variable: WORKDIR ACOUSTICS_WORKDIR `pwd`
13 set_array MULS -2.0e-2 -1.7e-2 -1.6e-2 -1.5e-2 -1.4e-2 -1.3e-2 -1.2e-2 -1.1e-2 -1.0e-2 -0.9e-2 -0.9e-2 -0.8e-2 -0.5e-2 +0.0e-2 +0.5e-2
14 set_variable FORMULA "[0] + [1] * ((x-[2])*(x-[2])/([3]*[3]))"
15 set_variable: FORMAT GRAPHICS_FORMAT gif
16 set_variable+ BATCH GRAPHICS_BATCH -B
17 
18 if do_usage $*; then
19  usage "$script <detector specific pre-calibration script> <option>"\
20  "\nAuxiliary script to make scan of pre-stretching of detector strings (see JEditDetector)."\
21  "\nPossible options: run, plot or fit."
22 fi
23 
24 if (( $# < 1 || $# > 2)); then
25  fatal "Wrong number of arguments."
26 fi
27 
28 # global variables
29 
30 set_variable SCRIPT $argv[1]
32 
33 if [[ $OPTION != "run" && $OPTION != "plot" && $OPTION != "fit" ]]; then
34  fatal "Invalid option $OPTION."
35 fi
36 
37 if [[ $OPTION == "run" ]]; then
38 
39  for MUL in $MULS[*]; do
40 
41  set_variable DIR $WORKDIR/mul=$MUL
42 
43  mkdir -p $DIR
44  cd $DIR
45 
46  # set varibales in script
47 
48  set_variable ACOUSTICS_MUL $MUL
49 
50  nohup $SCRIPT >& all.log &
51  done
52 fi
53 
54 if [[ $OPTION == "plot" || $OPTION == "fit" ]]; then
55 
56  set_variable ACOUSTICS_ZMUL_TXT ${TMPDIR:-/tmp}/acoustics-zmul.txt
57  set_variable ACOUSTICS_ZMUL_ROOT ${TMPDIR:-/tmp}/acoustics-zmul.root
58 
59  rm -f $ACOUSTICS_ZMUL_TXT >& /dev/null
60 
61  for MUL in $MULS[*]; do
62 
63  set_variable DIR $WORKDIR/mul=$MUL
64  set_variable FILE `ls $DIR/stage-(1|A).log`
65 
66  tail -1 $FILE | grep "Elapsed time" >& /dev/null
67 
68  if (( $? == 0 )); then
69 
70  set_array RESULT `grep -v "warning" $FILE | tail -2 | head -1`
71 
72  printf "%4.1e %6.3f\n" $MUL $RESULT[-1] >> $ACOUSTICS_ZMUL_TXT
73  fi
74  done
75 
76  JGraph \
77  -f $ACOUSTICS_ZMUL_TXT \
78  -o $ACOUSTICS_ZMUL_ROOT
79 
80  XMIN=`sort -k1g $ACOUSTICS_ZMUL_TXT | head -1 | awk '{ print $1 }'`
81  XMAX=`sort -k1g $ACOUSTICS_ZMUL_TXT | tail -1 | awk '{ print $1 }'`
82 
83  let "XMIN = $XMIN - 1.0e-3"
84  let "XMAX = $XMAX + 1.0e-3"
85 
86  if [[ $OPTION == "fit" ]]; then
87 
88  sort -gr -k2gr $ACOUSTICS_ZMUL_TXT | tail -1 | read X Y
89 
90  JFit \
91  -f ${ACOUSTICS_ZMUL_ROOT}:\.\* \
92  -o ${TMPDIR:-/tmp}/fit.root \
93  -F "$FORMULA" \
94  -@ "p0 = $Y" \
95  -@ "p1 = 0.1" \
96  -@ "p2 = $X" \
97  -@ "p3 = 0.002" \
98  -d $DEBUG
99 
100  set_array P2 `JPrintFit -f ${TMPDIR:-/tmp}/fit.root:\.\* -@p2`
101 
102  printf "Optimal stretching factor %8.2e\n" $P2[1]
103 
104  mv ${TMPDIR:-/tmp}/fit.root $ACOUSTICS_ZMUL_ROOT
105 
106  fi
107 
108  JPlot1D \
109  -f $ACOUSTICS_ZMUL_ROOT:\.\* \
110  -x "$XMIN $XMAX" \
111  -\> "M" \
112  -\^ "#chi^{2}/NDF" \
113  -T "" \
114  -o acoustics-zmul.$FORMAT $BATCH
115 fi
then cat $TRIPOD_INITIAL<< EOF1 256877.5 4743716.7-2438.42 256815.5 4743395.0-2435.53 257096.2 4743636.0-2439.5EOFfiJEditDetector-a $DETECTOR_INITIAL-s"-1 addz -6.9"-o $DETECTOReval`JPrintDetector-a $DETECTOR-O SUMMARY`for STRING in ${STRINGS[*]};do set_variable MODULE`getModule-a $DETECTOR-L"$STRING 0"`JEditDetector-a $DETECTOR-M"$MODULE setz -2.9"-o $DETECTORdonecp-p $TRIPOD_INITIAL $TRIPODJAcoustics.sh $DETECTOR_IDcat > acoustics_trigger_parameters txt<< EOFQ=0.0;TMax_s=0.020;numberOfHits=90;EOFJAcousticsEventBuilder.sh $DETECTOR $RUNS[*]INPUT_FILES=(`ls KM3NeT_ ${(l:8::0::0:) DETECTOR_ID}_0 *${^RUNS}_event.root`) cd $WORKDIRif[!$HOMEDIR-ef $WORKDIR];then cp-p $HOMEDIR/$DETECTOR $WORKDIR cp-p $HOMEDIR/$TRIPOD $WORKDIR cp-p $HOMEDIR/${^INPUT_FILES}$WORKDIR cp-p $HOMEDIR/{acoustics_fit_parameters, acoustics_trigger_parameters, disable, hydrophone, mechanics, sound_velocity, tripod, waveform}.txt $WORKDIRfisource $JPP_DIR/examples/JAcoustics/acoustics-fit-toolkit.shtimer_startinitialise stage_1B > &stage log
then usage $script< detector >< run >< outputfile > fi case set_variable OPTION
Definition: JTuna.sh:26
then usage $script< detector identifier >< startdate\"YYYY-MM-DDHH:MM:SS\"><finaldate\"YYYY-MM-DDHH:MM:SS\"><QA/QCfile> fi case set_variable QAQC_TXT $argv[4]
Definition: JDataMonitor.sh:24
std::istream & read(std::istream &in, JTestSummary &summary, const char delimiter= ' ')
Read test summary.
o $QUALITY_ROOT d $DEBUG!JPlot1D f
Definition: JDataQuality.sh:66
exit
Definition: JPizza.sh:36
do echo Generating $dir eval DIR
Definition: JPlotNPE1D.sh:54
then fatal Wrong number of arguments fi set_variable STRING $argv[1] set_variable DETECTORXY_TXT $WORKDIR $DETECTORXY_TXT tail read X Y CHI2 RMS printf optimum n $X $Y $CHI2 $RMS awk v Y
then echo
do FILE
Definition: JFilter.sh:49
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR &dev null set_variable
Definition: JAcoustics.sh:21
do set_variable STRING_TXT awk
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR if do_usage *then usage $script[(input file)+] fi set_variable DEBUG set_variable WORKDIR TMPDIR
do set_variable OUTPUT_DIRECTORY $WORKDIR T
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR &dev null set_variable DEBUG set_variable WORKDIR
Definition: JLegolas.sh:20
then awk F
* usage
then JConvertDetectorFormat a $DETECTOR[1] o
&set_variable FORMULA
p2
Definition: module-Z:fit.sh:74
then JMuonMCEvt f $INPUT_FILE o $INTERMEDIATE_FILE d
Definition: JMuonPath.sh:47
then display $WORKDIR
Definition: plot-Domino.sh:128
no fit printf nominal n $STRING awk v X
then let XMIN
data_type v[N+1][M+1]
Definition: JPolint.hh:756
then fatal Wrong number of arguments fi set_variable DETECTOR $argv[1] set_variable INPUT_FILE $argv[2] eval JPrintDetector a $DETECTOR O IDENTIFIER eval JPrintDetector a $DETECTOR O SUMMARY JAcoustics sh $DETECTOR_ID source JAcousticsToolkit sh CHECK_EXIT_CODE typeset A EMITTERS get_tripods $WORKDIR tripod txt EMITTERS get_transmitters $WORKDIR transmitter txt EMITTERS for EMITTER in
Definition: JCanberra.sh:46
source $JPP_DIR setenv csh $JPP_DIR &dev null eval JShellParser o a A
script
Definition: JAcoustics.sh:2
*fatal Wrong option $OPTION
esac $JPP_BIN JLogger sh $LOGGER until pgrep JGetMessage</dev/null > dev null
esac done
Definition: JAddHDE.sh:21
#define DEBUG(A)
Message macros.
Definition: JMessage.hh:62