pre-calibration_00000100.sh

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#!/bin/zsh
script=${0##*/}

# --------------------------------------------------------------------------------------------
#
# Steering script for the global-fit-of-global-fits procedure of the D0ORCA010 (100) detector.
#
# --------------------------------------------------------------------------------------------

if [ -z $JPP_DIR ]; then
    echo "Variable JPP_DIR undefined."
    exit
fi

source $JPP_DIR/setenv.sh $JPP_DIR >& /dev/null

set_variable  DETECTOR_ID            100
set_array     RUNS                   11342 11345 11347 11374 11376

if do_usage $*; then
    usage "$script <source directory> [user directory]"\
          "\nThe source directory corresponds to a pre-calibrated D_ORCA006 detector."\
          "\nThe user directory should be specified when this script is submitted in a batch queue."
fi

set_variable      WORKDIR            `pwd`
set_variable      HOMEDIR            $WORKDIR

case $# in
    2)  set_variable HOMEDIR              $2;&
    1)  set_variable DIR                  $1;;
    *)  fatal "Wrong number of arguments."
esac

set_variable  DETECTOR               $DIR/detector.datx
set_variable  TRIPOD                 $DIR/tripod.txt
set_variable  TRIPOD_INITIAL         tripod_initial.txt
set_variable  DETECTOR_INITIAL       detector_initial.datx
expand_array  RUNS


# Run in HOMEDIR

mkdir -p $HOMEDIR

cd  $HOMEDIR

if [[ ! -f $DETECTOR_INITIAL ]]; then

    JDetectorDB \
        -D $DETECTOR_ID       \
        -r $RUNS[1]           \
        -WW                   \
        -o $DETECTOR_INITIAL
fi

if [[ ! -f $TRIPOD_INITIAL ]]; then

    cat>$TRIPOD_INITIAL<<EOF
# Very preliminary acoustic emitter positions from survey
2  +256815.500 +4743395.000 -2436.677
3  +257096.200 +4743636.000 -2439.354
4  +256919.238 +4743354.178 -2439.354
EOF
fi

eval `JPrintDetector -a $DETECTOR_INITIAL -O SUMMARY`;  FINAL_STRINGS=($STRINGS[*])
eval `JPrintDetector -a $DETECTOR         -O SUMMARY`;  FIXED_STRINGS=($STRINGS[*])

if [[ ! -f detector.datx ]]; then

    # Apply modifications.

    JEditDetector \
        -a $DETECTOR_INITIAL     \
        -o detector.datx

    JEditDetector   -a detector.datx  -r "$FIXED_STRINGS[*]"  -o detector.datx
    JMergeDetector  -a detector.datx  -a $DETECTOR            -o detector.datx
    JEditDetector   -a detector.datx  -k "$FINAL_STRINGS[*]"  -o detector.datx
fi

source JAcousticsToolkit.sh

typeset -A TRIPODS

get_tripods  $TRIPOD_INITIAL  TRIPODS;  FINAL_TRIPODS=(${(k)TRIPODS[*]})
get_tripods  $TRIPOD          TRIPODS;  FIXED_TRIPODS=(${(k)TRIPODS[*]})

if [[ ! -f tripod.txt ]]; then

    cp -p  $TRIPOD_INITIAL  tripod.txt

    JEditTripod   -f tripod.txt  -r "${FIXED_TRIPODS}" -o tripod.txt
    JMergeTripod  -f tripod.txt  -f $TRIPOD            -o tripod.txt
    JEditTripod   -f tripod.txt  -k "${FINAL_TRIPODS}" -o tripod.txt
fi

set_variable  DETECTOR               detector.datx
set_variable  TRIPOD                 tripod.txt

echo Fixed strings: $FIXED_STRINGS[*]
echo Fixed tripods: $FIXED_TRIPODS[*]

JAcoustics.sh $DETECTOR_ID

cat>acoustics_trigger_parameters.txt<<EOF
Q             = 0.0;
TMax_s        = 0.015;
numberOfHits  = 150;
EOF

JAcousticsEventBuilder.sh  $DETECTOR  $RUNS[*]

INPUT_FILES=(`ls KM3NeT_${(l:8::0::0:)DETECTOR_ID}_0*${^RUNS}_event.root`)


# Run in WORKDIR

cd  $WORKDIR

if [ ! $HOMEDIR -ef $WORKDIR ]; then
    cp -p $HOMEDIR/$DETECTOR               $WORKDIR
    cp -p $HOMEDIR/${^ACOUSTICS_KEYS}.txt  $WORKDIR
    cp -p $HOMEDIR/${^INPUT_FILES}         $WORKDIR
fi

source $JPP_DIR/examples/JAcoustics/acoustics-fit-toolkit.sh

timer_start

initialise

fixStrings  $FIXED_STRINGS[*]
fixTripods  $FIXED_TRIPODS[*]

stage_0   1  0  100.0e-6  0.5        10  >&  stage-0.log;   backup $HOMEDIR/0;   timer_lap
stage_b   1  0  100.0e-6  0.002 0.1   0  >&  stage-1B.log;  backup $HOMEDIR/1B;  timer_lap
stage_a   1  0  100.0e-6  0.2   0.5  20  >&  stage-2A.log;  backup $HOMEDIR/2A;  timer_lap
stage_c   1  0  100.0e-6  0.2        20  >&  stage-2C.log;  backup $HOMEDIR/2C;  timer_lap

initialise

stage_a   1  0  100.0e-6  0.2   0.5  20  >&  stage-2a.log;  backup $HOMEDIR/2a;  timer_lap
stage_c   1  0  100.0e-6  0.2        20  >&  stage-2c.log;  backup $HOMEDIR/2c;  timer_lap
stage_a   1  0   50.0e-6  0.2   0.5  20  >&  stage-3a.log;  backup $HOMEDIR/3a;  timer_lap
stage_c   1  0   50.0e-6  0.2        20  >&  stage-3c.log;  backup $HOMEDIR/3c;  timer_lap

if [ ! $HOMEDIR -ef $WORKDIR ]; then
    cp -vru * $HOMEDIR
fi

clean