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pre-calibration_D1ORCA015.sh
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1 #!/bin/zsh
2 script=${0##*/}
3 
4 # --------------------------------------------------------------------------------------------
5 #
6 # Steering script for the global-fit-of-global-fits procedure of the D1ORCA015 (146) detector.
7 # It is assumed that this script is using the D0ORCA015 detector as the input detector.
8 #
9 # --------------------------------------------------------------------------------------------
10 
11 if [ -z $JPP_DIR ]; then
12  echo "Variable JPP_DIR undefined."
13  exit
14 fi
15 
16 source $JPP_DIR/setenv.sh $JPP_DIR >& /dev/null
17 
18 set_variable DETECTOR_ID 146
19 set_array RUNS 16386 16387 16388 16389 16390 16391 16392
20 set_variable: THREADS ACOUSTICS_THREADS 5
21 
22 if do_usage $*; then
23  usage "$script <source directory> [user directory]"\
24  "\nThe source directory corresponds to a pre-calibrated D0ORCA015 detector."\
25  "\nThe user directory should be specified when this script is submitted in a batch queue."
26 fi
27 
28 set_variable WORKDIR `pwd`
29 set_variable HOMEDIR $WORKDIR
30 
31 case $# in
32  2) set_variable HOMEDIR $2;&
33  1) set_variable DIR ${1:a};;
34  *) fatal "Wrong number of arguments."
35 esac
36 
37 
38 set_variable DETECTOR $DIR/detector.datx
39 set_variable TRIPOD $DIR/tripod.txt
40 set_variable TRIPOD_INITIAL tripod_initial.txt
41 expand_array RUNS
42 
43 
44 # Run in HOMEDIR
45 
46 mkdir -p $HOMEDIR
47 
48 cd $HOMEDIR
49 
50 if [[ ! -f $TRIPOD_INITIAL ]]; then
51 
52  cat>$TRIPOD_INITIAL<<EOF
53 # position of emitter 5 taken from https://elog.km3net.de/Operations+FR/8271 (RAB1v2)
54 # position of emitter 6 taken from https://elog.km3net.de/Operations+FR/8731 (RAB2)
55 # position of emitter 8 taken from https://elog.km3net.de/Operations+FR/9603 (RAB3)
56 5 +257040.800 +4743317.600 -2439.900
57 6 +256807.500 +4743636.500 -2442.500
58 8 +257118.100 +4743781.100 -2440.300
59 EOF
60 fi
61 
62 if [[ ! -f detector.datx ]]; then
63 
64  # Apply modifications.
65  JEditDetector \
66  -a $DETECTOR \
67  -@ "id=146" \
68  -o detector.datx --!
69 fi
70 eval `JPrintDetector -a detector.datx -O SUMMARY`; FIXED_STRINGS=($STRINGS[*])
71 
72 source JAcousticsToolkit.sh
73 
74 typeset -A TRIPODS
75 
76 get_tripods $TRIPOD_INITIAL TRIPODS; FINAL_TRIPODS=(${(k)TRIPODS[*]})
77 get_tripods $TRIPOD TRIPODS; FIXED_TRIPODS=(${(k)TRIPODS[*]})
78 
79 if [[ ! -f tripod.txt ]]; then
80 
81  cp -p $TRIPOD_INITIAL tripod.txt
82 
83  JEditTripod -f tripod.txt -r "${FIXED_TRIPODS}" -o tripod.txt
84  JMergeTripod -f tripod.txt -f $TRIPOD -o tripod.txt
85  JEditTripod -f tripod.txt -k "${FINAL_TRIPODS}" -o tripod.txt
86 fi
87 
88 set_variable DETECTOR detector.datx
89 set_variable TRIPOD tripod.txt
90 
91 echo Fixed strings: $FIXED_STRINGS[*]
92 echo Fixed tripods: $FIXED_TRIPODS[*]
93 
94 JAcoustics.sh $DETECTOR_ID
95 
96 cat>acoustics_trigger_parameters.txt<<EOF
97 Q = 0.0;
98 TMax_s = 0.015;
99 numberOfHits = 200;
100 EOF
101 
102 cat>disable.txt<<EOF
103 # disable transmissions
104 # <emitter identifier> <module identifier>
105 # all emit. and ORCA.0003.16
106 -1 808966194
107 EOF
108 
109 cat>transmitter.txt<<EOF
110 # Data are derived from the anchor drawing and the sea operation survey (for the heading)
111 #7 20 0 +0.020 -0.970 +0.710
112 EOF
113 
114 JAcousticsEventBuilder.sh $DETECTOR $RUNS[*]
115 
116 INPUT_FILES=(`ls KM3NeT_${(l:8::0::0:)DETECTOR_ID}_0*${^RUNS}_event.root`)
117 
118 
119 # Run in WORKDIR
120 
121 cd $WORKDIR
122 
123 if [ ! $HOMEDIR -ef $WORKDIR ]; then
124  cp -p $HOMEDIR/$DETECTOR $WORKDIR
125  cp -p $HOMEDIR/${^ACOUSTICS_KEYS}.txt $WORKDIR
126  cp -p $HOMEDIR/${^INPUT_FILES} $WORKDIR
127 fi
128 
129 cat>script.txt<<EOF
130 
131 fix string $FIXED_STRINGS[*]
132 fix tripod $FIXED_TRIPODS[*]
133 
134 stage 0 1 0 100.0e-6 10.0 10 0.5
135 
136 initialise
137 
138 stage 2a 1 0 100.0e-6 10.0 20 0.2 0.5
139 stage 2c 1 0 100.0e-6 10.0 20 0.2
140 stage 3a 1 0 50.0e-6 10.0 20 0.2 0.5
141 stage 3c 1 0 50.0e-6 10.0 20 0.2
142 EOF
143 
144 JSydney.sh $DETECTOR $INPUT_FILES[*] script.txt
145 
146 if [ ! $HOMEDIR -ef $WORKDIR ]; then
147  cp -vru * $HOMEDIR
148 fi
k
then fatal No hydrophone data file $HYDROPHONE_TXT fi sort gr k
Definition: hydrophone-phi:fit.sh:35
Q
Q(UTCMax_s-UTCMin_s)-livetime_s
stage
$WORKDIR stage
Definition: pre-calibration.sh:45
cat
then JLigier sh continue fi cat
Definition: JDAQDriver.sh:51
DETECTOR_ID
then fatal Wrong number of arguments fi set_variable DETECTOR $argv[1] set_variable INPUT_FILE $argv[2] eval JPrintDetector a $DETECTOR O SUMMARY JPrintDAQHeader f $INPUT_FILE read A DAQ_HEADER set_variable DETECTOR_ID
Definition: JSquid.sh:28
f
o $QUALITY_ROOT d $DEBUG!CHECK_EXIT_CODE JPlot1D f
Definition: JDataQuality.sh:76
exit
exit
Definition: JPizza.sh:36
tripods
then fatal Number of tripods
Definition: JFootprint.sh:45
strings
then usage $script< detector specific pre-calibration script >< option > nAuxiliary script to make scan of pre stretching of detector strings(see JEditDetector)." "\nPossible options
Definition: acoustics-Zmul.sh:20
JTOOLS::r
data_type r[M+1]
Definition: JPolint.hh:868
RUNS
&set_variable RUNS
Definition: datalogs.sh:21
then
then
Definition: datalogs.sh:31
$DETECTOR_ID
then fatal Wrong number of arguments fi set_variable DETECTOR $argv[1] set_variable TRIPOD $argv[2] set_array INPUT_FILES $argv[3,-1] eval JPrintDetector a $DETECTOR O IDENTIFIER eval JPrintDetector a $DETECTOR O CAN JAcoustics sh $DETECTOR_ID
Definition: footprint.sh:38
DIR
then fatal Wrong number of arguments fi DIR
Definition: acoustics-diff.sh:28
o
then fatal Wrong number of arguments fi JConvertDetectorFormat a o
Definition: software/JDetector/compare-detector.sh:31
$STRINGS
do JCanberra a $DETECTOR f $INPUT_FILE o $WORKDIR canberra[${EMITTER}\] root T $WORKDIR tripod txt V $WORKDIR sound_velocity txt M $WORKDIR mechanics txt H $WORKDIR hydrophone txt E $EMITTER $DISABLE d $DEBUG!done kill_child_processes_at_exit attach getModule a $DETECTOR typeset Z STRING typeset Z FLOOR for STRING in $STRINGS[*]
Definition: JCanberra.sh:70
transmitter
then fatal Missing detector file $DETECTOR fi eval JPrintDetector a $DETECTOR O IDENTIFIER for KEY in tripod hydrophone transmitter
Definition: archive-pre-calibration.sh:36
KM3NeT_
do JPrintDAQHeader f $INPUT_FILE d read DETECTOR_ID RUN FRAME_INDEX TIMESLICE_START set_variable OUTPUT_FILE $WORKDIR KM3NeT_
Definition: JTunePMTThreshold.sh:52
$RUNS
then fatal Detector file should be binary format fi eval JPrintDetector a $DETECTOR O IDENTIFIER typeset a INPUT_FILES expand_array RUNS for RUN in $RUNS[*]
Definition: software/JCompass/JCompass.sh:49
set_variable
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR &dev null set_variable
Definition: JAcoustics.sh:21
a
then JCalibrateToT a
Definition: JTuneHV.sh:113
$INPUT_FILES
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR set_variable DEBUG set_variable WORKDIR if do_usage *then usage for INPUT_FILE in $INPUT_FILES[*]
Definition: JCheckTriggerParameters.sh:31
WORKDIR
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR &dev null set_variable DEBUG set_variable WORKDIR
Definition: JLegolas.sh:20
usage
* usage
Definition: JLigier-local.sh:34
https
then fatal Timeout at user input fi set_variable SERVER JServerDB wget no check certificate q https
Definition: JCookie.sh:58
INPUT_FILES
do sput $STRING $FLOOR sget MODULE INPUT_FILES
Definition: JCanberra.sh:79
c
$WORKDIR ev_configure_dqsimulator txt echo process $DQ_SIMULATOR $i $SOURCE_HOST[$index] csh c(setenv ROOTSYS $ROOTSYS &&source $JPP_DIR/setenv.csh $JPP_DIR &&($DQ_SIMULATOR\-u\$NAME\$\-H\$SERVER\$\-M\$LOGGER\$\-d $DEBUG</dev/null > &/dev/null &))'
$WORKDIR
fi set_variable FILENAME $WORKDIR
Definition: datalogs.sh:34
in
then fatal Wrong number of arguments fi set_variable DETECTOR $argv[1] set_variable INPUT_FILE $argv[2] eval JPrintDetector a $DETECTOR O IDENTIFIER eval JPrintDetector a $DETECTOR O SUMMARY JAcoustics sh $DETECTOR_ID source JAcousticsToolkit sh CHECK_EXIT_CODE typeset A EMITTERS get_tripods $WORKDIR tripod txt EMITTERS get_transmitters $WORKDIR transmitter txt EMITTERS for EMITTER in
Definition: JCanberra.sh:48
$DETECTOR
then set_variable MODULE getModule a $DETECTOR L $STRING $FLOOR JEditDetector a $DETECTOR M $MODULE add $X o $DETECTOR else echo No update of detector $DETECTOR
Definition: module-Z:fit.sh:118
Run
then error Missing CDF files error Run
Definition: JSirene.sh:58
cp
then cp
Definition: darkroomCalibration.sh:41
DETECTOR
set_variable DETECTOR
Definition: JARCACalibrateMuon.sh:31
detector
do set_variable DETECTOR_TXT $WORKDIR detector
Definition: detector-XY:fit1d.sh:38
echo
then echo
Definition: JQAQC.sh:90
HOMEDIR
then usage $script[user directory] nThe user directory should be specified when this script is submitted in a batch queue fi set_variable WORKDIR pwd set_variable HOMEDIR $WORKDIR case set_variable HOMEDIR
Definition: pre-calibration_D0ARCA006.sh:31
A
source $JPP_DIR setenv csh $JPP_DIR &dev null eval JShellParser o a A
Definition: JShellParser.csh:15
script
script
Definition: JAcoustics.sh:2
$TRIPOD
then fatal Invalid tripod $TRIPOD
Definition: tripod-XY:run.sh:39
null
esac $JPP_BIN JLogger sh $LOGGER until pgrep JGetMessage</dev/null > dev null
Definition: examples/JLogger/JLogger.sh:33
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