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pre-calibration_D1ORCA015.sh
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1 #!/bin/zsh
2 script=${0##*/}
3 
4 # --------------------------------------------------------------------------------------------
5 #
6 # Steering script for the global-fit-of-global-fits procedure of the D1ORCA015 (146) detector.
7 # It is assumed that this script is using the D0ORCA015 detector as the input detector.
8 #
9 # --------------------------------------------------------------------------------------------
10 
11 if [ -z $JPP_DIR ]; then
12  echo "Variable JPP_DIR undefined."
13  exit
14 fi
15 
16 source $JPP_DIR/setenv.sh $JPP_DIR >& /dev/null
17 
18 set_variable DETECTOR_ID 146
19 set_array RUNS 16386 16387 16388 16389 16390 16391 16392
20 set_variable: THREADS ACOUSTICS_THREADS 5
21 set_variable WORKDIR `pwd`
22 set_variable HOMEDIR $WORKDIR
23 
24 if do_usage $*; then
25  usage "$script <source directory> [user directory]"\
26  "\nThe source directory corresponds to a pre-calibrated D0ORCA015 detector."\
27  "\nThe user directory should be specified when this script is submitted in a batch queue."
28 fi
29 
30 case $# in
31  2) set_variable HOMEDIR $2;&
32  1) set_variable DIR ${1:a};;
33  *) fatal "Wrong number of arguments."
34 esac
35 
36 source JAcousticsToolkit.sh
37 
38 set_variable DETECTOR $DIR/detector.datx
39 set_variable TRIPOD $DIR/tripod.txt
40 set_variable TRIPOD_INITIAL tripod_initial.txt
41 expand_array RUNS
42 
43 
44 # Run in HOMEDIR
45 
46 mkdir -p $HOMEDIR
47 cd $HOMEDIR
48 
49 cat>$TRIPOD_INITIAL<<EOF
50 # position of emitter 5 taken from https://elog.km3net.de/Operations+FR/8271 (RAB1v2)
51 # position of emitter 6 taken from https://elog.km3net.de/Operations+FR/8731 (RAB2)
52 # position of emitter 8 taken from https://elog.km3net.de/Operations+FR/9603 (RAB3)
53 5 +257040.800 +4743317.600 -2439.900
54 6 +256807.500 +4743636.500 -2442.500
55 8 +257118.100 +4743781.100 -2440.300
56 EOF
57 
58 # Apply modifications.
59 
60 JEditDetector \
61  -a $DETECTOR \
62  -@ "id=$DETECTOR_ID" \
63  -o detector.datx
64 
65 eval `JPrintDetector -a detector.datx -O SUMMARY`; FIXED_STRINGS=($STRINGS[*])
66 
67 typeset -A TRIPODS
68 
69 get_tripods $TRIPOD_INITIAL TRIPODS; FINAL_TRIPODS=(${(k)TRIPODS[*]})
70 get_tripods $TRIPOD TRIPODS; FIXED_TRIPODS=(${(k)TRIPODS[*]})
71 
72 cp -p $TRIPOD_INITIAL tripod.txt
73 
74 JEditTripod -f tripod.txt -r "${FIXED_TRIPODS}" -o tripod.txt
75 JMergeTripod -f tripod.txt -f $TRIPOD -o tripod.txt
76 JEditTripod -f tripod.txt -k "${FINAL_TRIPODS}" -o tripod.txt
77 
78 cat>acoustics_trigger_parameters.txt<<EOF
79 Q = 0.0;
80 TMax_s = 0.015;
81 numberOfHits = 200;
82 EOF
83 
84 cat>disable.txt<<EOF
85 # disable transmissions
86 # <emitter identifier> <module identifier>
87 # all emit. and ORCA.0003.16
88 -1 808966194
89 EOF
90 
91 TRIPOD=(tripod)
92 
93 cp -p $DIR/${^ACOUSTICS_AUXS:|TRIPOD}.txt .
94 
95 JAcousticsEventBuilder.sh detector.datx $RUNS[*]
96 
97 INPUT_FILES=(`ls KM3NeT_${(l:8::0::0:)DETECTOR_ID}_0*${^RUNS}_event.root`)
98 
99 
100 # Run in WORKDIR
101 
102 cd $WORKDIR
103 
104 if [ ! $HOMEDIR -ef $WORKDIR ]; then
105  cp -p $HOMEDIR/$ACOUSTICS_DETECTOR $WORKDIR
106  cp -p $HOMEDIR/${^ACOUSTICS_KEYS}.txt $WORKDIR
107  cp -p $HOMEDIR/${^ACOUSTICS_AUXS}.txt $WORKDIR
108  cp -p $HOMEDIR/${^INPUT_FILES} $WORKDIR
109 fi
110 
111 cat>script.txt<<EOF
112 
113 fix string $FIXED_STRINGS[*]
114 fix tripod $FIXED_TRIPODS[*]
115 
116 stage 0 1 0 100.0e-6 10.0 10 0.5
117 
118 initialise
119 
120 stage 2a 1 0 100.0e-6 10.0 20 0.2 0.5
121 stage 2c 1 0 100.0e-6 10.0 20 0.2
122 stage 3a 1 0 50.0e-6 10.0 20 0.2 0.5
123 stage 3c 1 0 50.0e-6 10.0 20 0.2
124 EOF
125 
126 JSydney.sh detector.datx $INPUT_FILES[*] script.txt
127 
128 if [ ! $HOMEDIR -ef $WORKDIR ]; then
129  cp -vru * $HOMEDIR
130 fi
k
then fatal No hydrophone data file $HYDROPHONE_TXT fi sort gr k
Definition: hydrophone-phi:fit.sh:35
Q
Q(UTCMax_s-UTCMin_s)-livetime_s
stage
$WORKDIR stage
Definition: pre-calibration.sh:45
$RUNS
then fatal Detector file should be binary format fi eval JPrintDetector a $DETECTOR O IDENTIFIER typeset a INPUT_FILES expand_array RUNS for RUN in $RUNS[*]
Definition: software/JCompass/JCompass.sh:49
cat
then JLigier sh continue fi cat
Definition: JDAQDriver.sh:51
HOMEDIR
then usage $script[user directory] nThe user directory should be specified when this script is submitted in a batch queue fi case set_variable HOMEDIR
Definition: pre-calibration_D0ARCA006.sh:30
DETECTOR_ID
then fatal Wrong number of arguments fi set_variable DETECTOR $argv[1] set_variable INPUT_FILE $argv[2] eval JPrintDetector a $DETECTOR O SUMMARY JPrintDAQHeader f $INPUT_FILE read A DAQ_HEADER set_variable DETECTOR_ID
Definition: JSquid.sh:28
f
o $QUALITY_ROOT d $DEBUG!CHECK_EXIT_CODE JPlot1D f
Definition: JDataQuality.sh:76
exit
exit
Definition: JPizza.sh:36
JTOOLS::r
data_type r[M+1]
Definition: JPolint.hh:868
then
then
Definition: datalogs.sh:31
DIR
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR &dev null set_variable DETECTOR_ID set_array RUNS if do_usage *then usage $script< source directory > nThe source directory corresponds to a pre calibrated D0ARCA009 detector fi case set_variable DIR
Definition: post-calibration_D0ARCA009.sh:20
o
then fatal Wrong number of arguments fi JConvertDetectorFormat a o
Definition: software/JDetector/compare-detector.sh:31
RUNS
then fatal Missing detector file $DETECTOR fi eval JPrintDetector a $DETECTOR O IDENTIFIER RUNS
Definition: archive-put-calibration.sh:38
$STRINGS
do JCanberra a $DETECTOR f $INPUT_FILE o $WORKDIR canberra[${EMITTER}\] root T $WORKDIR tripod txt V $WORKDIR sound_velocity txt M $WORKDIR mechanics txt H $WORKDIR hydrophone txt E $EMITTER $DISABLE d $DEBUG!done kill_child_processes_at_exit attach getModule a $DETECTOR typeset Z STRING typeset Z FLOOR for STRING in $STRINGS[*]
Definition: JCanberra.sh:70
KM3NeT_
do JPrintDAQHeader f $INPUT_FILE d read DETECTOR_ID RUN FRAME_INDEX TIMESLICE_START set_variable OUTPUT_FILE $WORKDIR KM3NeT_
Definition: JTunePMTThreshold.sh:52
a
then JCalibrateToT a
Definition: JTuneHV.sh:113
$INPUT_FILES
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR set_variable DEBUG set_variable WORKDIR if do_usage *then usage for INPUT_FILE in $INPUT_FILES[*]
Definition: JCheckTriggerParameters.sh:31
set_variable
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR &dev null set_variable
Definition: archive-get-calibration.sh:14
WORKDIR
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR &dev null set_variable DEBUG set_variable WORKDIR
Definition: JLegolas.sh:20
usage
* usage
Definition: JLigier-local.sh:34
https
then fatal Timeout at user input fi set_variable SERVER JServerDB wget no check certificate q https
Definition: JCookie.sh:58
INPUT_FILES
do sput $STRING $FLOOR sget MODULE INPUT_FILES
Definition: JCanberra.sh:79
c
$WORKDIR ev_configure_dqsimulator txt echo process $DQ_SIMULATOR $i $SOURCE_HOST[$index] csh c(setenv ROOTSYS $ROOTSYS &&source $JPP_DIR/setenv.csh $JPP_DIR &&($DQ_SIMULATOR\-u\$NAME\$\-H\$SERVER\$\-M\$LOGGER\$\-d $DEBUG</dev/null > &/dev/null &))'
$WORKDIR
fi set_variable FILENAME $WORKDIR
Definition: datalogs.sh:34
in
then fatal Wrong number of arguments fi set_variable DETECTOR $argv[1] set_variable INPUT_FILE $argv[2] eval JPrintDetector a $DETECTOR O IDENTIFIER eval JPrintDetector a $DETECTOR O SUMMARY JAcoustics sh $DETECTOR_ID source JAcousticsToolkit sh CHECK_EXIT_CODE typeset A EMITTERS get_tripods $WORKDIR tripod txt EMITTERS get_transmitters $WORKDIR transmitter txt EMITTERS for EMITTER in
Definition: JCanberra.sh:48
$DETECTOR
then set_variable MODULE getModule a $DETECTOR L $STRING $FLOOR JEditDetector a $DETECTOR M $MODULE add $X o $DETECTOR else echo No update of detector $DETECTOR
Definition: module-Z:fit.sh:118
Run
then error Missing CDF files error Run
Definition: JSirene.sh:58
cp
then cp
Definition: darkroomCalibration.sh:41
DETECTOR
set_variable DETECTOR
Definition: JARCACalibrateMuon.sh:31
detector
do set_variable DETECTOR_TXT $WORKDIR detector
Definition: detector-XY:fit1d.sh:38
echo
then echo
Definition: JQAQC.sh:96
A
source $JPP_DIR setenv csh $JPP_DIR &dev null eval JShellParser o a A
Definition: JShellParser.csh:15
$TRIPOD
then fatal Invalid tripod $TRIPOD
Definition: tripod-XY:run.sh:39
null
esac $JPP_BIN JLogger sh $LOGGER until pgrep JGetMessage</dev/null > dev null
Definition: examples/JLogger/JLogger.sh:33
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