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pre-calibration_D1ORCA013.sh
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1 #!/bin/zsh
2 script=${0##*/}
3 
4 # --------------------------------------------------------------------------------------------
5 #
6 # Auxiliary script to derive the geometry of the D1ORCA013 (117) detector from other detectors.
7 #
8 # --------------------------------------------------------------------------------------------
9 
10 if [ -z $JPP_DIR ]; then
11  echo "Variable JPP_DIR undefined."
12  exit
13 fi
14 
15 source $JPP_DIR/setenv.sh $JPP_DIR >& /dev/null
16 
17 set_variable DETECTOR_ID 117
18 
19 if do_usage $*; then
20  usage "$script <source directory A> <source directory B>" \
21  "\nThe source directory A corresponds to a pre-calibrated D0ORCA010 detector." \
22  "\nThe source directory B corresponds to a pre-calibrated D1ORCA011 detector."
23 fi
24 
25 case $# in
26  2) set_variable DIR_DETECTOR_A ${1:a}
27  set_variable DIR_DETECTOR_B ${2:a};;
28  *) fatal "Wrong number of arguments."
29 esac
30 
31 set_variable DETECTOR_A $DIR_DETECTOR_A/detector.datx
32 set_variable TRIPOD_A $DIR_DETECTOR_A/tripod.txt
33 set_variable DETECTOR_B $DIR_DETECTOR_B/detector.datx
34 set_variable TRIPOD_B $DIR_DETECTOR_B/tripod.txt
35 
36 if [[ ! -f $DETECTOR_A ]]; then
37  fatal "Missing pre-calibrated D0ORCA010 input detector file"
38 fi
39 
40 if [[ ! -f $DETECTOR_B ]]; then
41  fatal "Missing pre-calibrated D1ORCA011 input detector file"
42 fi
43 
44 if [[ ! -f $TRIPOD_B ]]; then
45  fatal "Missing pre-calibrated D1ORCA011 input tripod file"
46 fi
47 
48 # D1ORCA011 detector striped of all the new strings wrt D0ORCA011 and ID of D0ORCA011 assigned
49 JEditDetector \
50  -a $DETECTOR_B \
51  -@ "id=$DETECTOR_ID" \
52  -k "1 2 3 4 9 10 12 18 28" \
53  -o detector.datx
54 
55 # D0ORCA010 detector striped of all strings but the ones in D0ORCA011
56 JEditDetector \
57  -a $DETECTOR_A \
58  -k "1 2 3 9 10 11 12 19" \
59  -o detector_tmp.datx
60 
61 cat >tripod_tmp.txt<<EOF
62 EOF
63 
64 # D0ORCA010 detector aligned with D1ORCA011 at the base level.
65 JAlignDetector \
66  -A \
67  -O \
68  -a detector_tmp.datx \
69  -T tripod_tmp.txt \
70  -b detector.datx \
71  -r 0-0
72 
73 # D0ORCA010 detector striped of all the strings but ORCA.0011
74 JEditDetector \
75  -a detector_tmp.datx \
76  -k "11 19" \
77  -o detector_tmp.datx
78 
79 # The two detector merged
80 JMergeDetector \
81  -a detector.datx \
82  -a detector_tmp.datx \
83  -o detector.datx
84 
85 JEditTripod \
86  -f $TRIPOD_B \
87  -r "6" \
88  -o tripod.txt
89 
90 rm -f tripod_tmp.txt
91 rm -f detector_tmp.datx
92 
93 echo "# $script" > disable.txt
94 grep -E -v "^#" $DIR_DETECTOR_A/disable.txt >> disable.txt
95 grep -E -v "^#" $DIR_DETECTOR_B/disable.txt >> disable.txt
96 
97 JEditTransmitter \
98  -f $DIR_DETECTOR_B/transmitter.txt \
99  -k "1 2 3 4 9 10 12 18 28" \
100  -o transmitter.txt
101 
102 JEditTransmitter \
103  -f $DIR_DETECTOR_A/transmitter.txt \
104  -k "11 19" \
105  -o transmitter_tmp.txt
106 
107 JMergeTransmitter \
108  -f transmitter.txt \
109  -f transmitter_tmp.txt \
110  -o transmitter.txt
111 
112 rm -f transmitter_tmp.txt
113 
114 JEditHydrophone \
115  -f $DIR_DETECTOR_B/hydrophone.txt \
116  -k "1 2 3 4 9 10 12 18 28" \
117  -o hydrophone.txt
118 
119 JEditHydrophone \
120  -f $DIR_DETECTOR_A/hydrophone.txt \
121  -k "11 19" \
122  -o hydrophone_tmp.txt
123 
124 JMergeHydrophone \
125  -f hydrophone.txt \
126  -f hydrophone_tmp.txt \
127  -o hydrophone.txt
128 
129 rm -f hydrophone_tmp.txt
k
then fatal No hydrophone data file $HYDROPHONE_TXT fi sort gr k
Definition: hydrophone-phi:fit.sh:35
JASTRONOMY::ORCA
static const JGeographicalLocation ORCA(42, 48, 06, 02)
E
then usage $script< input file >[option[primary[working directory]]] nWhere option can be E
Definition: JMuonPostfit.sh:40
cat
then JLigier sh continue fi cat
Definition: JDAQDriver.sh:51
DETECTOR_ID
then fatal Wrong number of arguments fi set_variable DETECTOR $argv[1] set_variable INPUT_FILE $argv[2] eval JPrintDetector a $DETECTOR O SUMMARY JPrintDAQHeader f $INPUT_FILE read A DAQ_HEADER set_variable DETECTOR_ID
Definition: JSquid.sh:28
exit
exit
Definition: JPizza.sh:36
strings
then usage $script< detector specific pre-calibration script >< option > nAuxiliary script to make scan of pre stretching of detector strings(see JEditDetector)." "\nPossible options
Definition: acoustics-Zmul.sh:20
JTOOLS::r
data_type r[M+1]
Definition: JPolint.hh:868
then
then
Definition: datalogs.sh:34
DIR_DETECTOR_A
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR &dev null set_variable DETECTOR_ID if do_usage *then usage $script< source directory A >< sourcedirectoryB > nThe source directory A corresponds to a pre calibrated D0ORCA010 detector nThe source directory B corresponds to a pre calibrated D1ORCA011 detector fi case set_variable DIR_DETECTOR_A
Definition: pre-calibration_D0ORCA007.sh:26
o
then fatal Wrong number of arguments fi JConvertDetectorFormat a o
Definition: software/JDetector/compare-detector.sh:31
rm
then rm
Definition: sftpput.zsh:30
a
then JCalibrateToT a
Definition: JTuneHV.sh:107
grep
do grep(chi2\[.\]\|gradient\|string:\)" $INPUT_FILE > $WORKDIR/stage.txt awk 'BEGIN
Definition: plot-acoustics-fit.sh:33
T
do set_variable OUTPUT_DIRECTORY $WORKDIR T
Definition: JCalibrateHeight.sh:61
set_variable
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR &dev null set_variable
Definition: archive-get-calibration.sh:14
usage
* usage
Definition: JLigier-local.sh:34
z
then usage $script[energy[distance[z of PMT]]] fi case set_variable z
Definition: JDrawPDF.sh:45
in
then fatal The output file must have the wildcard in the e g root fi eval JPrintDetector a $DETECTOR O IDENTIFIER eval JPrintDetector a $DETECTOR O SUMMARY JAcoustics sh $DETECTOR_ID source JAcousticsToolkit sh CHECK_EXIT_CODE typeset A EMITTERS get_tripods $WORKDIR tripod txt EMITTERS get_transmitters $WORKDIR transmitter txt EMITTERS for EMITTER in
Definition: JCanberra.sh:48
f
then JHobbit a $DETECTOR f
Definition: software/JCalibrate/JHobbit.sh:42
detector
do set_variable DETECTOR_TXT $WORKDIR detector
Definition: detector-XY:fit1d.sh:38
JTOOLS::v
data_type v[N+1][M+1]
Definition: JPolint.hh:866
echo
then echo
Definition: JQAQC.sh:92
A
source $JPP_DIR setenv csh $JPP_DIR &dev null eval JShellParser o a A
Definition: JShellParser.csh:15
null
esac $JPP_BIN JLogger sh $LOGGER until pgrep JGetMessage</dev/null > dev null
Definition: examples/JLogger/JLogger.sh:33
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