7# ------------------------------------------------------------------------------------------
9# Script to run the JPP Track Reconstruction Chain for ORCA.
11# ------------------------------------------------------------------------------------------
13if [ -z $JPP_DIR ]; then
14 echo "Variable JPP_DIR undefined."
18source $JPP_DIR/setenv.sh $JPP_DIR
19source $JPP_DIR/externals/km3net-dataformat/definitions/reconstruction.sh
21set_variable: DEBUG RECONSTRUCTION_DEBUG 1
22set_variable: PDF RECONSTRUCTION_PDF $JPP_DATA/J%p.dat
23set_variable: SUFFIX RECONSTRUCTION_SUFFIX jmuon
24set_variable: NUMBER_OF_EVENTS RECONSTRUCTION_NUMBER_OF_EVENTS $((2**31))
25set_variable: NUMBER_OF_THREADS RECONSTRUCTION_NUMBER_OF_THREADS 0
26set_variable+ OVERWRITE RECONSTRUCTION_OVERWRITE 1
27set_variable: TMAX_S RECONSTRUCTION_TMAX_S 100
30 usage "$script <detector file> <input file> <output file> <PMT parameters file> [(calibration file)+]"
34 fatal "Wrong number of arguments."
37set_variable DETECTOR $argv[1]
38set_variable INPUT_FILE $argv[2]
39set_variable OUTPUT_FILE $argv[3]
40set_variable PMT $argv[4]
41set_array CALIBRATION $argv[5,-1]
43if [[ ! "$OUTPUT_FILE" == *"%"* ]]; then
44 fatal "The output file must have the wildcard % in the name, e.g. %.root"
48typeset -a APPLICATIONS
53if [[ "$OVERWRITE" == 1 ]]; then
55 ${OUTPUT_FILE/\%/jprefit} \
56 ${OUTPUT_FILE/\%/jsimplex} \
57 ${OUTPUT_FILE/\%/jstart} \
58 ${OUTPUT_FILE/\%/jgandalf} \
59 ${OUTPUT_FILE/\%/jstart2} \
60 ${OUTPUT_FILE/\%/jenergy} \
61 ${OUTPUT_FILE/\%/jhistory} \
62 ${OUTPUT_FILE/\%/${SUFFIX}} \
63 ${OUTPUT_FILE/\%/${SUFFIX}.offline}
67if (( ${#CALIBRATION} != 0 )); then
68 getMechanics.sh $DETECTOR
72# ------------------------------------------------------------------------------------------
74# ------------------------------------------------------------------------------------------
96 -o ${OUTPUT_FILE/\%/jprefit} \
97 -n ${NUMBER_OF_EVENTS} \
98 -N ${NUMBER_OF_THREADS} \
99 -@ `make_equation PARAMETERS` \
104APPLICATIONS+=$JMUONPREFIT
110# ------------------------------------------------------------------------------------------
112# ------------------------------------------------------------------------------------------
127 -f ${OUTPUT_FILE/\%/jprefit} \
128 -o ${OUTPUT_FILE/\%/jsimplex} \
129 -N ${NUMBER_OF_THREADS} \
130 -@ `make_equation PARAMETERS` \
135rm -vf ${OUTPUT_FILE/\%/jprefit}
137APPLICATIONS+=$JMUONSIMPLEX
143# ------------------------------------------------------------------------------------------
145# ------------------------------------------------------------------------------------------
162 -f ${OUTPUT_FILE/\%/jsimplex} \
163 -o ${OUTPUT_FILE/\%/jstart} \
165 -N ${NUMBER_OF_THREADS} \
166 -@ `make_equation PARAMETERS` \
171rm -vf ${OUTPUT_FILE/\%/jsimplex}
173APPLICATIONS+=$JMUONSTART
179# ------------------------------------------------------------------------------------------
181# ------------------------------------------------------------------------------------------
200 -f ${OUTPUT_FILE/\%/jstart} \
201 -o ${OUTPUT_FILE/\%/jgandalf} \
203 -N ${NUMBER_OF_THREADS} \
204 -@ `make_equation PARAMETERS` \
209rm -vf ${OUTPUT_FILE/\%/jstart}
211APPLICATIONS+=$JMUONGANDALF
217# ------------------------------------------------------------------------------------------
219# ------------------------------------------------------------------------------------------
236 -f ${OUTPUT_FILE/\%/jgandalf} \
237 -o ${OUTPUT_FILE/\%/jstart2} \
239 -N ${NUMBER_OF_THREADS} \
240 -@ `make_equation PARAMETERS` \
245rm -vf ${OUTPUT_FILE/\%/jgandalf}
247APPLICATIONS+=$JMUONSTART
253# ------------------------------------------------------------------------------------------
255# ------------------------------------------------------------------------------------------
275 -f ${OUTPUT_FILE/\%/jstart2} \
276 -o ${OUTPUT_FILE/\%/jenergy} \
278 -N ${NUMBER_OF_THREADS} \
279 -@ `make_equation PARAMETERS` \
284rm -vf ${OUTPUT_FILE/\%/jstart2}
286APPLICATIONS+=$JMUONENERGY
292# ------------------------------------------------------------------------------------------
294# ------------------------------------------------------------------------------------------
299 -f ${OUTPUT_FILE/\%/jenergy} \
300 -o ${OUTPUT_FILE/\%/jhistory} \
301 -A "$APPLICATIONS[*]" \
306rm -vf ${OUTPUT_FILE/\%/jenergy}
312# ------------------------------------------------------------------------------------------
313# rename outputfile and remove intermediate files
314# ------------------------------------------------------------------------------------------
319 ${OUTPUT_FILE/\%/jhistory} \
320 ${OUTPUT_FILE/\%/${SUFFIX}}
326# ------------------------------------------------------------------------------------------
328# ------------------------------------------------------------------------------------------
333 -f ${OUTPUT_FILE/\%/${SUFFIX}} \
334 -o ${OUTPUT_FILE/\%/${SUFFIX}.offline} \