Abstract base class for implementations of the JMarkovIntegrator interface, where the sample distribution is based on histograms filled from an ensemble of representative paths.
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#include <JMarkovIntegrator.hh>
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| JMarkovEnsembleIntegrator (const vector< JPhotonPath > &_ensemble, JTargetModel *_trg, int _nbinsx, int _nbinsy, int _nbinsz) |
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virtual | ~JMarkovEnsembleIntegrator () |
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virtual void | writeHistograms ()=0 |
| write the histograms filled from the ensemble More...
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vector< double > | integrate (int N, int nscat, JSourceModel *src, JScatteringModel *sm, JTargetModel *trg, double lambda_abs) |
| Integrate with N samples. More...
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vector< double > | dummy_integrate (int N, int nscat, JSourceModel *src, JScatteringModel *sm, JTargetModel *trg, double lambda_abs) |
| Integrate a test function with N samples. More...
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vector< JPhotonPath > | get_diagnostic_ensemble (int N, int nscat, JSourceModel *src, JScatteringModel *sm, JTargetModel *trg, double lambda_abs) |
| Return photon paths generated with the generatePath method. More...
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Abstract base class for implementations of the JMarkovIntegrator interface, where the sample distribution is based on histograms filled from an ensemble of representative paths.
Definition at line 198 of file JMarkovIntegrator.hh.
JMARKOV::JMarkovEnsembleIntegrator::JMarkovEnsembleIntegrator |
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const vector< JPhotonPath > & |
_ensemble, |
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JTargetModel * |
_trg, |
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int |
_nbinsx, |
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int |
_nbinsy, |
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int |
_nbinsz |
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inline |
Definition at line 202 of file JMarkovIntegrator.hh.
205 cerr <<
"FATAL ERROR in JMarkov3DensembleIntegrator constructor. Ensemble size = 0." << endl ;
210 for( vector<JPhotonPath>::iterator it=
ensemble.begin(); it!=
ensemble.end(); ++it ) {
211 if( (*it)[0].getDistance(
ensemble.front()[0]) > 0 ) {
212 cerr <<
"Fatal error in JMarkovEnsembleIntegrator, first vertex positions are not all the same." << endl ;
vector< JPhotonPath > ensemble
JPosition3D source_position
virtual JMARKOV::JMarkovEnsembleIntegrator::~JMarkovEnsembleIntegrator |
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inlinevirtual |
virtual void JMARKOV::JMarkovEnsembleIntegrator::writeHistograms |
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pure virtual |
JPosition3D JMARKOV::JMarkovEnsembleIntegrator::generatePosition |
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int |
nscat, |
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int |
nv, |
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double & |
winv |
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inlineprotectedvirtual |
generate a position for vertex nv for the given number of scatterings, winv will be set to 1/weight
Implements JMARKOV::JMarkovIntegrator.
Definition at line 228 of file JMarkovIntegrator.hh.
235 if( nv == nscat+1 ) {
239 JPosition3D pos =
target_gens[nscat]->getPosition() ;
virtual JPosition3D generateScatteringVertexPosition(int nscat, int nv, double &winv)=0
void initgenerators(int nscat)
initialize the position generators for a given number of scatterings (i.e. create histograms and fill...
vector< JSphereGenerator * > target_gens
JPosition3D source_position
virtual JPosition3D JMARKOV::JMarkovEnsembleIntegrator::generateScatteringVertexPosition |
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int |
nscat, |
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int |
nv, |
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double & |
winv |
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protectedpure virtual |
int JMARKOV::JMarkovEnsembleIntegrator::getIndex |
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int |
nv, |
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int |
nscat |
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inlineprotected |
return the internal index for a given number of scatterings and vertex number
Definition at line 251 of file JMarkovIntegrator.hh.
259 return (nscat*(nscat-1))/2 + nv - 1 ;
void JMARKOV::JMarkovEnsembleIntegrator::initgenerators |
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int |
nscat | ) |
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inlineprotected |
initialize the position generators for a given number of scatterings (i.e. create histograms and fill them from the ensemble)
Definition at line 263 of file JMarkovIntegrator.hh.
virtual void init_scattering_vertex_generators(int nscat)=0
void init_target_generator(int nscat)
initialize the generator for a target vertex for a given number of scatterings
void JMARKOV::JMarkovEnsembleIntegrator::init_target_generator |
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int |
nscat | ) |
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inlineprotected |
initialize the generator for a target vertex for a given number of scatterings
Definition at line 272 of file JMarkovIntegrator.hh.
278 sprintf( hname,
"htarget_nscat%i", nscat ) ;
279 TH2D* ht =
new TH2D(hname,
";cos(#theta);#phi",100,-1,1,100,-M_PI,M_PI) ;
280 for( vector<JPhotonPath>::iterator it=
ensemble.begin() ; it!=
ensemble.end() ; ++it ) {
283 ht->Fill( dir.getDZ(), dir.getPhi() ) ;
vector< JSphereGenerator * > target_gens
const JPosition3D & getPosition() const
Implementation of the JGenerator interface.
then print u2 $script< option > print u2 Possible continue
vector< JPhotonPath > ensemble
virtual void JMARKOV::JMarkovEnsembleIntegrator::init_scattering_vertex_generators |
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int |
nscat | ) |
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protectedpure virtual |
void JMARKOV::JMarkovEnsembleIntegrator::free_target_gens |
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inlineprotected |
Definition at line 295 of file JMarkovIntegrator.hh.
297 if( *it != NULL )
delete *it ;
vector< JSphereGenerator * > target_gens
Integrate with N samples.
Returns a vector with the contribution to the integral of each sample. The mean of those values is the estimate of the result of the integral, while the distribution itself can be used to estimate the stability of the result. In this distribution, you want to avoid
- long tails (because they make the result unstable)
- small contributions (because it means that parts of the parameter space are being oversampled, so it is less efficient) This can be achieved by tuning the sample distribution to the problem at hand.
Definition at line 130 of file JMarkovIntegrator.hh.
131 vector<double> contributions(
N,-1) ;
133 for(
int i=0 ; i<
N ; ++i ) {
138 contributions[i] = rho * winv ;
140 return contributions ;
virtual JPhotonPath generatePath(int nscat, double &winv)
Generate a random photon path with a given number of scatterings.
double getPhotonPathProbabilityDensity(JPhotonPath &p, JSourceModel *src, JScatteringModel *sm, JTargetModel *trg, double lambda_abs)
Return the probability density for a photon path with the given ingredients.
then usage $script[input file[working directory[option]]] nWhere option can be N
Integrate a test function with N samples.
This can be used as a sanity check for derived classes of JMarkovIntegrator.
The integral should yield 1 when the complete relevant part of the volume is taken into account. If it does not, it may be a sign that the implementation is not correct.
Returns a vector with the contribution to the integral of each sample.
Definition at line 143 of file JMarkovIntegrator.hh.
144 vector<double> contributions(
N,-1) ;
146 for(
int i=0 ; i<
N ; ++i ) {
147 const double r = 10 ;
150 double rho = 1.0/(4.0/3.0*M_PI*r*r*
r) ;
151 if( p[1].getLength()>
r ) rho = 0 ;
152 contributions[i] = rho * winv ;
154 return contributions ;
virtual JPhotonPath generatePath(int nscat, double &winv)
Generate a random photon path with a given number of scatterings.
then usage $script[input file[working directory[option]]] nWhere option can be N
Return photon paths generated with the generatePath method.
This can be used to identify the parts of parameter space that are over- or undersampled in a given problem so that the integrator may be optimized to handle those better.
Definition at line 157 of file JMarkovIntegrator.hh.
158 vector<JPhotonPath> paths ;
160 for(
int i=0 ; i<
N ; ++i ) {
virtual JPhotonPath generatePath(int nscat, double &winv)
Generate a random photon path with a given number of scatterings.
then usage $script[input file[working directory[option]]] nWhere option can be N
virtual JPhotonPath JMARKOV::JMarkovIntegrator::generatePath |
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int |
nscat, |
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double & |
winv |
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inlineprotectedvirtualinherited |
Generate a random photon path with a given number of scatterings.
winv must be set to the inverted probability density to generate this particular path.
Definition at line 94 of file JMarkovIntegrator.hh.
99 for(
int nv=0 ; nv<nscat+2 ; ++nv ) {
virtual JPosition3D generatePosition(int nscat, int nv, double &winv)=0
Generate a random position for vertex nv.
int JMARKOV::JMarkovEnsembleIntegrator::nbinsx |
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int JMARKOV::JMarkovEnsembleIntegrator::nbinsy |
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int JMARKOV::JMarkovEnsembleIntegrator::nbinsz |
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JPosition3D JMARKOV::JMarkovEnsembleIntegrator::source_position |
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The documentation for this class was generated from the following file: