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software/JCompass/JCompass.sh
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1 #!/bin/zsh
2 #
3 #
4 # \author mdejong
5 #
6 version=1.0
7 script=${0##*/}
8 
9 if [ -z $JPP_DIR ]; then
10  echo "Variable JPP_DIR undefined."
11  exit
12 fi
13 
14 source $JPP_DIR/setenv.sh $JPP_DIR
15 
16 set_variable DEBUG ${COMPASS_DEBUG:-2}
17 set_variable WORKDIR ${COMPASS_WORKDIR:-./}
18 set_variable TMAX_S ${COMPASS_TMAX_S:-600}
19 set_variable SIGMA_DEG ${COMPASS_SIGMA_DEG:-0.5}
20 set_variable STDEV ${COMPASS_STDEV:-5.0}
21 set_variable MESTIMATOR ${COMPASS_MESTIMATOR:-1}
22 set_variable NUMBER_OF_OUTLIERS ${COMPASS_NUMBER_OF_OUTLIERS:-150}
23 
24 if ( do_usage $* ); then
25  usage "$script <detector file> (run[-run])+"
26 fi
27 
28 if (( $# < 2 )); then
29  fatal "Wrong number of parameters."
30 fi
31 
33 set_array RUNS $argv[2,-1]
34 
36 set_variable AHRS_CALIBRATION_FILE $WORKDIR/ahrs_calibration.txt
37 
38 if [[ ! ${DETECTOR##*\.} == "dat" ]]; then
39 
40  notice "Switch to binary detector file format."
41 
42  JConvertDetectorFormat \
43  -a ${DETECTOR} \
44  -o ${DETECTOR%%\.*}.dat \
45  --!
46 
47  set_variable DETECTOR ${DETECTOR%%\.*}.dat
48 
49 fi
50 
51 eval `JPrintDetector -a $DETECTOR -O IDENTIFIER`
52 
53 typeset -a INPUT_FILES
54 
55 for RANGE in $RUNS[*]; do
56 
57  for (( RUN = ${RANGE%%-*}; $RUN <= ${RANGE##*-}; RUN += 1 )); do
58 
59  set_variable INPUT_FILE $WORKDIR/KM3NeT_${(l:8::0::0:)DETECTOR_ID}_${(l:8::0::0:)RUN}_ahrs.root
60 
61  if [[ ! -f $INPUT_FILE ]]; then
62 
63  echo -n "Writing $INPUT_FILE... "
64 
65  JConvertDB \
66  -q "ahrs" \
67  -@ "detid = $DETECTOR_ID" \
68  -@ "minrun = $RUN" \
69  -@ "maxrun = $RUN" \
70  -o $INPUT_FILE \
71  -d $DEBUG --
72 
73  if (( $? == 0 )); then
74  echo "OK"
75  else
76  continue
77  fi
78  fi
79 
81 
82  done
83 done
84 
85 if [[ ! -f $AHRS_CALIBRATION_FILE ]]; then
86 
87  JAHRSCalibration \
88  -D $DETECTOR_ID \
89  -o $AHRS_CALIBRATION_FILE \
90  -d $DEBUG
91 fi
92 
94 
95 JCompass \
96  -a $DETECTOR \
97  -A \
98  -c $AHRS_CALIBRATION_FILE \
99  -f "$INPUT_FILES[*]" \
100  -o $OUTPUT_FILE \
101  -@ "Tmax_s = $TMAX_S" \
102  -@ "sigma_deg = $SIGMA_DEG" \
103  -@ "stdev = $STDEV" \
104  -@ "mestimator = $MESTIMATOR" \
105  -@ "numberOfOutliers = $NUMBER_OF_OUTLIERS" \
106  -d $DEBUG --!
107 
108 timer_stop
109 timer_print
do echo Generating $dir eval D
Definition: JDrawLED.sh:50
then usage else fatal Wrong number of arguments fi JCookie sh eval JPrintDetector a $DETECTOR O IDENTIFIER source JAcoustics sh $DETECTOR_ID CHECK_EXIT_CODE for RANGE in $RUNS[*]
void set_variable(const std::string &name, const std::string &value)
Set environment variable.
set_variable INPUT_FILE
exit
Definition: JPizza.sh:36
then JPizza f
Definition: JPizza.sh:46
then echo
then timer_start(JRandomTimesliceWriter-a ${DETECTOR}-o ${PIPE}-n ${NUMBER_OF_SLICES}-P ${PMT_FILE}-d ${DEBUG}-S ${SEED}-B"$BACKGROUND_HZ"-N"$RECYCLING"--!&&for((i=0;$i!=10;++i));do;echo 'EOF' > $PIPE;usleep 100000;done &&rm-f $PIPE)&JTimesliceReprocessor-a $
then rm i $OUTPUT_FILE fi let RUN
do $DIR JTransitTime o
Definition: JTransitTime.sh:44
* usage
set_array INPUT_FILES
then JFileTuna f $INPUT_FILE
Definition: file-Tuna.sh:66
*set_variable DETECTOR $argv[1] set_variable INPUT_FILE $argv[2,-2] set_variable OUTPUT_FILE $argv[-1]
Definition: JDomino.sh:39
&set_variable OUTPUT_FILE
then JMuonMCEvt f $INPUT_FILE o $INTERMEDIATE_FILE d
Definition: JMuonPath.sh:45
then JCalibrateToT a
Definition: JTuneHV.sh:116
then set_variable MODULE getModule a $DETECTOR L $STRING $FLOOR JEditDetector a $DETECTOR M $MODULE add $X o $DETECTOR else echo No update of detector $DETECTOR
alias put_queue eval echo n
Definition: qlib.csh:19
then display $WORKDIR
Definition: plot-Domino.sh:127
set_array RUNS
Definition: JDataQuality.sh:23
set_variable DETECTOR
do set_variable INPUT_FILE $WORKDIR KM3NeT_
then fatal Wrong number of arguments fi set_variable DETECTOR $argv[1] set_variable INPUT_FILE $argv[2] eval JPrintDetector a $DETECTOR O IDENTIFIER eval JPrintDetector a $DETECTOR O SUMMARY source JAcoustics sh $DETECTOR_ID CHECK_EXIT_CODE typeset A TRIPODS get_tripods $WORKDIR tripod txt TRIPODS for EMITTER in
Definition: JCanberra.sh:38
version
Definition: JCalibratePMT.sh:7
then usage $script< detector file >< inputfile > fi case set_variable WORKDIR
Definition: JLegolas.sh:28
source $JPP_DIR setenv csh $JPP_DIR eval JShellParser o a A
esac done
Definition: JAddHDE.sh:21
do if[[!-f $ACOUSTICS_WORKDIR/${KEY}.txt]]
Definition: JAcoustics.sh:38
#define DEBUG(A)
Message macros.
Definition: JMessage.hh:62