Jpp  15.0.2
the software that should make you happy
 All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Friends Macros Pages
software/JCompass/JCompass.sh
Go to the documentation of this file.
1 #!/bin/zsh
2 #
3 #
4 # \author mdejong
5 #
6 version=1.0
7 script=${0##*/}
8 
9 if [ -z $JPP_DIR ]; then
10  echo "Variable JPP_DIR undefined."
11  exit
12 fi
13 
14 source $JPP_DIR/setenv.sh $JPP_DIR
15 
16 set_variable: DEBUG COMPASS_DEBUG 2
17 set_variable: WORKDIR COMPASS_WORKDIR ./
18 set_variable: TMAX_S COMPASS_TMAX_S 600
19 set_variable: SIGMA_DEG COMPASS_SIGMA_DEG 0.5
20 set_variable: STDEV COMPASS_STDEV 5.0
21 set_variable: MESTIMATOR COMPASS_MESTIMATOR 1
22 set_variable: NUMBER_OF_OUTLIERS COMPASS_NUMBER_OF_OUTLIERS 0
23 
24 if do_usage $*; then
25  usage "$script <detector file> (run[-run])+ <output file>"\
26  "\nAuxiliary script for in situ compass calibration."
27 fi
28 
29 if (( $# < 3 )); then
30  fatal "Wrong number of parameters."
31 fi
32 
34 set_array RUNS $argv[2,-2]
35 set_variable OUTPUT_FILE $argv[-1]
36 
37 set_variable AHRS_CALIBRATION_FILE $WORKDIR/ahrs_calibration.txt
38 
39 if [[ ! ${DETECTOR##*\.} == "datx" ]]; then
40 
41  notice "Switch to binary detector file format."
42 
43  JConvertDetectorFormat \
44  -a ${DETECTOR} \
45  -o ${DETECTOR%%\.*}.datx \
46  --!
47 
48  set_variable DETECTOR ${DETECTOR%%\.*}.datx
49 
50 fi
51 
52 eval `JPrintDetector -a $DETECTOR -O IDENTIFIER`
53 
54 typeset -a INPUT_FILES
55 
56 for RANGE in $RUNS[*]; do
57 
58  for (( RUN = ${RANGE%%-*}; $RUN <= ${RANGE##*-}; RUN += 1 )); do
59 
60  set_variable INPUT_FILE $WORKDIR/KM3NeT_${(l:8::0::0:)DETECTOR_ID}_${(l:8::0::0:)RUN}_ahrs.root
61 
62  if [[ ! -f $INPUT_FILE ]]; then
63 
64  echo -n "Writing $INPUT_FILE... "
65 
66  JConvertDB \
67  -q "ahrs" \
68  -@ "detid = $DETECTOR_ID" \
69  -@ "minrun = $RUN" \
70  -@ "maxrun = $RUN" \
71  -o $INPUT_FILE \
72  -d $DEBUG --
73 
74  if (( $? == 0 )); then
75  echo "OK"
76  else
77  continue
78  fi
79  fi
80 
82 
83  done
84 done
85 
86 if [[ ! -f $AHRS_CALIBRATION_FILE ]]; then
87 
88  JAHRSCalibration \
89  -D $DETECTOR_ID \
90  -o $AHRS_CALIBRATION_FILE \
91  -d $DEBUG
92 fi
93 
95 
96 JCompass \
97  -a $DETECTOR \
98  -A \
99  -c $AHRS_CALIBRATION_FILE \
100  -f "$INPUT_FILES[*]" \
101  -o $OUTPUT_FILE \
102  -@ "Tmax_s = $TMAX_S" \
103  -@ "sigma_deg = $SIGMA_DEG" \
104  -@ "stdev = $STDEV" \
105  -@ "mestimator = $MESTIMATOR" \
106  -@ "numberOfOutliers = $NUMBER_OF_OUTLIERS" \
107  -d $DEBUG --!
108 
109 timer_stop
110 timer_print
then usage $script< detector file >< detectorfile > nIf the range of floors is the first detector file is aligned to the second before the comparison fi case set_variable RANGE $argv[3]
then JMuonPostfit f
then usage $script< detector file >< inputfile > nUtility script to create PDF and CDF of transition time distribution fi case set_variable WORKDIR
Definition: JLegolas.sh:31
set_variable INPUT_FILE
exit
Definition: JPizza.sh:36
then usage set_variable OUTPUT_FILE $argv[-1] set_variable AHRS_CALIBRATION_FILE $WORKDIR ahrs_calibration txt eval JPrintDetector a $DETECTOR O IDENTIFIER typeset a INPUT_FILES for RANGE in $RUNS[*]
Definition: JBallarat.sh:39
then echo
const int n
Definition: JPolint.hh:660
then timer_start(JRandomTimesliceWriter-a ${DETECTOR}-o ${PIPE}-n ${NUMBER_OF_SLICES}-P ${PMT_FILE}-d ${DEBUG}-S ${SEED}-B"$BACKGROUND_HZ"-N"$RECYCLING"--!&&for((i=0;$i!=10;++i));do;echo 'EOF' > $PIPE;usleep 100000;done &&rm-f $PIPE)&JTimesliceReprocessor-a $
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR &dev null if do_usage *then usage $script< detector identifier > fi case set_variable DETECTOR_ID
Definition: JTDC.sh:11
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR &dev null set_variable
Definition: JAcoustics.sh:20
then rm i $OUTPUT_FILE fi let RUN
do $DIR JTransitTime o
Definition: JTransitTime.sh:44
* usage
set_array INPUT_FILES
then JFileTuna f $INPUT_FILE
Definition: file-Tuna.sh:66
&set_variable OUTPUT_FILE
then JMuonMCEvt f $INPUT_FILE o $INTERMEDIATE_FILE d
Definition: JMuonPath.sh:47
then JCalibrateToT a
Definition: JTuneHV.sh:116
then set_variable MODULE getModule a $DETECTOR L $STRING $FLOOR JEditDetector a $DETECTOR M $MODULE add $X o $DETECTOR else echo No update of detector $DETECTOR
then usage $script< input_file >< detector_file > fi set_variable OUTPUT_DIR set_variable SELECTOR JDAQTimesliceL1 set_variable DEBUG case set_variable DEBUG
then display $WORKDIR
Definition: plot-Domino.sh:128
set_variable DETECTOR
do set_variable INPUT_FILE $WORKDIR KM3NeT_
then fatal Wrong number of arguments fi set_variable DETECTOR $argv[1] set_variable INPUT_FILE $argv[2] eval JPrintDetector a $DETECTOR O IDENTIFIER eval JPrintDetector a $DETECTOR O SUMMARY source JAcoustics sh $DETECTOR_ID CHECK_EXIT_CODE typeset A TRIPODS get_tripods $WORKDIR tripod txt TRIPODS for EMITTER in
Definition: JCanberra.sh:41
set_variable NUMBER_OF_ITERATIONS set_variable EPSILON cat acoustics_fit_parameters txt<< EOF $CONFIGURATION[*]Nmin=3;sigma_s=100.0e-6;stdev=10.0;mestimator=0;fixStrings=0;EOF for STRING in $STRINGS[*];do#fit stretching and(z) position of given string set_variable DETECTOR_TMP/tmp/detector_A.datx JEditDetector-a $DETECTOR-o $DETECTOR_TMP-r $STRING JEditDetector-a $DETECTOR-o $DETECTOR-k $STRING for MUL in 0.005 0.001;do DX_M=0.2 for((N=0;$N< $NUMBER_OF_ITERATIONS;++N));do CHI2[3]=$CHI2[1] fitPositionOfString $STRING Z $DX_M fitStretchingOfString $STRING $MUL if(($CHI2[3]-$CHI2[1]< $EPSILON));then break fi done if(($N >=$NUMBER_OF_ITERATIONS));then printf"warning: reached maximum number of iterations %d - converenge %7.3f\n"$N $(($CHI2[3]-$CHI2[1])) fi done JMergeDetector-a $DETECTOR-a $DETECTOR_TMP-o $DETECTOR rm-f $DETECTOR_TMP JConvertDetectorFormat-a $DETECTOR-o $DETECTOR-r-d 0 > &dev null done
do echo Generating $dir eval D
Definition: JDrawLED.sh:53
version
Definition: JCalibratePMT.sh:7
set_array RUNS
Definition: JDataQuality.sh:23
source $JPP_DIR setenv csh $JPP_DIR eval JShellParser o a A
do if[[!-f $ACOUSTICS_WORKDIR/${KEY}.txt]]
Definition: JAcoustics.sh:39