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JSirene.sh
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1 #!/bin/zsh
2 #
3 # \author mdejong
4 #
5 # utility script for Sirene Monte Carlo.
6 script=${0##*/}
7 
8 # ------------------------------------------------------------------------------------------
9 #
10 # Example script to run JSirene.
11 #
12 # ------------------------------------------------------------------------------------------
13 
14 if [ -z $JPP_DIR ]; then
15  echo "Variable JPP_DIR undefined."
16  exit
17 fi
18 
19 source $JPP_DIR/setenv.sh $JPP_DIR
20 
21 set_variable: DEBUG SIRENE_DEBUG 1
23 set_variable CDF $JPP_DATA/I%p.dat
24 set_variable INPUT_FILE $JPP_DATA/genhen.km3net_wpd_V2_0.evt.gz
26 set_variable DETECTOR $JPP_DATA/km3net_reference.detx
27 set_variable+ KEEP SIRENE_KEEP -k
28 set_variable: SEED SIRENE_SEED 0
29 set_variable: FACTOR SIRENE_FACTOR 1.0
30 
31 if do_usage $*; then
32  usage "$script [detector file (input file)+ [output file [CDF file descriptor]]]]"\
33  "\nAuxiliary script for simulation of detector response."\
34  "\nNote that if more than one input file is specified, all other arguments must be provided."
35 fi
36 
37 case $# in
38  4) set_variable CDF $4;&
42  0) ;;
47 esac
48 
49 # Sanity checks
50 
51 print_variable DETECTOR INPUT_FILE OUTPUT_FILE CDF
52 
53 for TYPE in 1 2 5 6 13 14; do
54  if [[ ! -f ${CDF/\%/${TYPE}} ]]; then
55  error "Missing CDF files."
56  error "Run: JMakePDF.sh"
57  JMakePDF.sh -h
58  exit
59  fi
60 done
61 
62 if [[ ! -f $DETECTOR ]]; then
63  error "Missing detector file."
64  error "Run: JDetector.sh"
65  JDetector.sh -h
66  exit
67 fi
68 
69 check_input_file $DETECTOR $INPUT_FILE
70 check_output_file $OUTPUT_FILE
71 
73 
74 JSirene \
75  -F $CDF \
76  -a $DETECTOR \
77  -f $INPUT_FILE \
78  -o $OUTPUT_FILE \
79  -@ "Tmax_ns=2.0;" \
80  -U $FACTOR \
81  $KEEP \
82  -S $SEED \
83  -d $DEBUG --!
84 
85 timer_stop
86 timer_print
87 
88 JPrintMeta \
89  -f $OUTPUT_FILE
90 
91 JPrintSirene \
92  -f $OUTPUT_FILE
93 
94 JPrintTree \
95  -f $OUTPUT_FILE
then usage $script< detector file >< detectorfile > nIf the range of floors is the first detector file is aligned to the second before the comparison nIn only modules within the given range of floors are used fi case set_variable RANGE $argv[3]
then usage $script[detector file(input file)+[output file[CDF file descriptor]]] nAuxiliary script for simulation of detector response nNote that if more than one input file is all other arguments must be provided fi case set_variable CDF
Definition: JSirene.sh:34
then fatal No hydrophone data file $HYDROPHONE_TXT fi sort gr k
set_variable INPUT_FILE
o $QUALITY_ROOT d $DEBUG!JPlot1D f
Definition: JDataQuality.sh:66
exit
Definition: JPizza.sh:36
then echo
then timer_start(JRandomTimesliceWriter-a ${DETECTOR}-o ${PIPE}-n ${NUMBER_OF_SLICES}-P ${PMT_FILE}-d ${DEBUG}-S ${SEED}-B"$BACKGROUND_HZ"-N"$RECYCLING"--!&&for((i=0;$i!=10;++i));do;echo 'EOF' > $PIPE;usleep 100000;done &&rm-f $PIPE)&JTimesliceReprocessor-a $
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR &dev null set_variable
Definition: JAcoustics.sh:20
set_variable NUMBER_OF_ITERATIONS set_variable EPSILON cat acoustics_fit_parameters txt<< EOF $CONFIGURATION[*]Nmin=3;sigma_s=100.0e-6;stdev=10.0;mestimator=0;fixStrings=0;EOF for STRING in $STRINGS[*];do#fit stretching and(z) position of given string set_variable DETECTOR_TMP ${TMPDIR:-/tmp}/detector_A.datx JEditDetector-a $DETECTOR-o $DETECTOR_TMP-r $STRING JEditDetector-a $DETECTOR-o $DETECTOR-k $STRING for MUL in 0.005 0.001;do DX_M=0.2 for((N=0;$N< $NUMBER_OF_ITERATIONS;++N));do CHI2[3]=$CHI2[1] fitPositionOfString $STRING Z $DX_M fitStretchingOfString $STRING $MUL if(($CHI2[3]-$CHI2[1]< $EPSILON));then break fi done if(($N >=$NUMBER_OF_ITERATIONS));then printf"warning: reached maximum number of iterations %d - converenge %7.3f\n"$N $(($CHI2[3]-$CHI2[1])) fi done JMergeDetector-a $DETECTOR-a $DETECTOR_TMP-o $DETECTOR rm-f $DETECTOR_TMP JConvertDetectorFormat-a $DETECTOR-o $DETECTOR-r-d 0 > &dev null done
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR &dev null set_variable DEBUG set_variable WORKDIR
Definition: JLegolas.sh:20
then awk F
* usage
then JConvertDetectorFormat a $DETECTOR[1] o
then JFileTuna f $INPUT_FILE
Definition: file-Tuna.sh:66
do set_variable SIGMA_NS set_variable OUTLIERS set_variable OUTPUT_FILE matrix[${ALPHA_DEG}\deg\] root $JPP JMatrixNZ a $DETECTOR f $INPUT_FILE o $OUTPUT_FILE S
Definition: JMatrixNZ.sh:58
&set_variable OUTPUT_FILE
then JMuonMCEvt f $INPUT_FILE o $INTERMEDIATE_FILE d
Definition: JMuonPath.sh:47
then JCalibrateToT a
Definition: JTuneHV.sh:116
then set_variable MODULE getModule a $DETECTOR L $STRING $FLOOR JEditDetector a $DETECTOR M $MODULE add $X o $DETECTOR else echo No update of detector $DETECTOR
then usage $script< input_file >< detector_file > fi set_variable OUTPUT_DIR set_variable SELECTOR JDAQTimesliceL1 set_variable DEBUG case set_variable DEBUG
then display $WORKDIR
Definition: plot-Domino.sh:128
set_variable DETECTOR
then fatal Wrong number of arguments fi set_variable DETECTOR $argv[1] set_variable INPUT_FILE $argv[2] eval JPrintDetector a $DETECTOR O IDENTIFIER eval JPrintDetector a $DETECTOR O SUMMARY source JAcoustics sh $DETECTOR_ID CHECK_EXIT_CODE typeset A TRIPODS get_tripods $WORKDIR tripod txt TRIPODS for EMITTER in
Definition: JCanberra.sh:42
script
Definition: JAcoustics.sh:2