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module-Z:fit.sh
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1 #!/bin/zsh
2 script=${0##*/}
3 
4 if [ -z $JPP_DIR ]; then
5  echo "Variable JPP_DIR undefined."
6  exit
7 fi
8 
9 source $JPP_DIR/setenv.sh $JPP_DIR >& /dev/null
10 
11 set_variable: DEBUG ACOUSTICS_DEBUG 2
12 set_variable: WORKDIR ACOUSTICS_WORKDIR ./
13 #set_variable FORMULA "[0] + [1] * log(1.0 + 0.5*(x-[2])*(x-[2])/([3]*[3]))"
14 set_variable FORMULA "[0] + [1] * ((x-[2])*(x-[2])/([3]*[3]))"
15 set_variable MINIMAL_DZ 0.01
16 set_variable: FORMAT GRAPHICS_FORMAT gif
17 set_variable+ BATCH GRAPHICS_BATCH -B
18 
19 if do_usage $*; then
20  usage "$script <string identifier> <floor[-floor]> [<detector file>]"
21 fi
22 
23 if (( $# < 2 || $# > 3 )); then
24  fatal "Wrong number of arguments."
25 fi
26 
27 set_variable STRING $argv[1]
28 set_variable FLOORS $argv[2]
29 
30 for (( FLOOR = ${FLOORS%%-*}; $FLOOR <= ${FLOORS##*-}; FLOOR += 1 )); do
31 
32  typeset -Z 0 STRING
33  typeset -Z 0 FLOOR
34 
35  set_variable MODULE_TXT $WORKDIR/modulez_${STRING}_${FLOOR}.txt
36  set_variable MODULE_ROOT $WORKDIR/modulez_${STRING}_${FLOOR}.root
37  set_variable G1_TXT $WORKDIR/g1.txt
38  set_variable G1_ROOT $WORKDIR/g1.root
39 
40  if [[ ! -f $MODULE_TXT ]] then
41  fatal "No file $MODULE_TXT."
42  fi
43 
44  JGraph \
45  -f $MODULE_TXT \
46  -o $MODULE_ROOT
47 
48  sort -g -k 2,2 $MODULE_TXT | tail -1 | read X ZMAX RMS
49  sort -gr -k 2,2 $MODULE_TXT | tail -1 | read X ZMIN RMS
50 
51  echo $X $ZMIN > $G1_TXT;
52 
53  JGraph \
54  -f $G1_TXT \
55  -o $G1_ROOT
56 
57  awk '
58  BEGIN {
59  XMIN = +1e3
60  XMAX = -1e3
61  }
62  END { print XMIN, XMAX }
63  {
64  if ( $1 < XMIN ) { XMIN = $1 }
65  if ( $1 > XMAX ) { XMAX = $1 }
66  }
67  ' $MODULE_TXT | read XMIN XMAX
68 
69  if (( $X > $XMIN && $X < $XMAX )); then
70 
71  let DZ="0.5*($ZMAX - $ZMIN)"
72 
73  if (( $ZMAX - $ZMIN < $MINIMAL_DZ )); then
74  set_variable OPTION "-= p1 = 0.0; p2 = 0.0; p3 = 1.0"
75  else
76  set_variable OPTION
77  fi
78 
79  JFit \
80  -f ${MODULE_ROOT}:\.\* \
81  -o $WORKDIR/fit.root \
82  -F "$FORMULA" \
83  -@ "p0 = $ZMIN" \
84  -@ "p1 = $DZ" \
85  -@ "p2 = $X" \
86  -@ "p3 = 0.15" \
87  "$OPTION" \
88  -d $DEBUG
89 
90  set_array P2 `JPrintFit -f $WORKDIR/fit.root:\.\* -@p2`
91 
92  set_variable X $P2[1]
93 
94  printf "nominal %4d %2d %7.3f %7.3f\n" $STRING $FLOOR 0.0 `JPrintFit -f $WORKDIR/fit.root:\.\* -x "0.0"`
95  printf "optimal %4d %2d %7.3f %7.3f\n" $STRING $FLOOR $X `JPrintFit -f $WORKDIR/fit.root:\.\* -x "$X"`
96 
97  mv $WORKDIR/fit.root $MODULE_ROOT
98 
99  else
100 
101  echo "Optimum value at limit; -> no fit."
102  printf "nominal %4d %2d %7.3f %7.3f\n" $STRING $FLOOR 0.0 `awk -v X=0.0 '{ if ($1 == X) { print $2 }}' $MODULE_TXT`
103  printf "optimal %4d %2d %7.3f %7.3f\n" $STRING $FLOOR $X $ZMIN
104 
105  fi
106 
107  if (( $# == 3 )); then
108 
109  set_variable DETECTOR $argv[3]
110 
111  if (( $ZMAX - $ZMIN >= $MINIMAL_DZ )); then
112 
113  set_variable MODULE `getModule -a $DETECTOR -L "$STRING $FLOOR"`
114 
115  JEditDetector -a $DETECTOR -M "$MODULE add 0.0 0.0 $X" -o $DETECTOR
116 
117  else
118  echo "No update of detector $DETECTOR; z-range ($ZMAX-$ZMIN) < $MINIMAL_DZ."
119  fi
120  fi
121 
122  typeset -Z 4 STRING
123  typeset -Z 2 FLOOR
124 
125  JPlot1D \
126  -f ${MODULE_ROOT}:\.\* \
127  -f ${G1_ROOT}:\.\* \
128  -\> "#Deltaz [m]" \
129  -\^ "#chi^{2}/NDF" \
130  -N "X 505" \
131  -T "($STRING,$FLOOR)" \
132  -o $WORKDIR/modulez_${STRING}_${FLOOR}.$FORMAT $BATCH
133 
134  rm -f $MODULE_ROOT $G1_TXT $G1_ROOT
135 
136 done
137 
138 if [[ "$FLOORS" == "1-18" ]]; then
139 
140  echo -n "Creating graphics for string $STRING.."
141 
142  montage \
143  -tile 6x3 \
144  -geometry +0+0 \
145  $WORKDIR/modulez_${STRING}_*.$FORMAT \ $WORKDIR/modulez_${STRING}.$FORMAT >& /dev/null
146 
147  echo " -> $WORKDIR/modulez_${STRING}.$FORMAT"
148 
149  rm -f $WORKDIR/modulez_${STRING}_*.$FORMAT
150 
151 fi
152 
OPTION
then usage $script< detector >< run >< outputfile > fi case set_variable OPTION
Definition: JTuna.sh:26
k
then fatal No hydrophone data file $HYDROPHONE_TXT fi sort gr k
Definition: hydrophone-phi:fit.sh:35
M
do $JPP JMEstimator M
Definition: JMEstimator.sh:37
$argv
*set_variable DETECTOR_ID $argv[1] set_array RUNS $argv[2,-2]
Definition: JDataQuality.sh:24
JCOMPAREHISTOGRAMS::read
std::istream & read(std::istream &in, JTestSummary &summary, const char delimiter= ' ')
Read test summary.
Definition: JTestSummary.hh:222
STRING
clean eval JPrintDetector a $DETECTOR O IDENTIFIER eval JPrintDetector a $DETECTOR O SUMMARY set_variable STRING
Definition: examples/JTrigger/JTriggerEfficiencyRunByRun.sh:64
f
o $QUALITY_ROOT d $DEBUG!JPlot1D f
Definition: JDataQuality.sh:66
N
then JShowerPostfit f $INPUT_FILE o $OUTPUT_FILE N
Definition: JShowerPostfit.sh:95
exit
exit
Definition: JPizza.sh:36
echo
then echo
Definition: JDOMDAQDriver.sh:56
DZ
do echo $TRIPODS[${key}] read X Y Z let DZ
Definition: JFootprint.sh:66
JTOOLS::n
const int n
Definition: JPolint.hh:676
$STRING
then fatal Invalid string $STRING
Definition: detector-XY:run.sh:35
set_variable
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR &dev null set_variable
Definition: JAcoustics.sh:20
awk
do set_variable STRING_TXT awk
Definition: plot-canberra.sh:192
T
do set_variable OUTPUT_DIRECTORY $WORKDIR T
Definition: JCalibrateHeight.sh:61
X
then break fi done getCenter read X Y Z let X
Definition: acoustics-fit.sh:523
done
set_variable NUMBER_OF_ITERATIONS set_variable EPSILON cat acoustics_fit_parameters txt<< EOF $CONFIGURATION[*]Nmin=3;sigma_s=100.0e-6;stdev=10.0;mestimator=0;fixStrings=0;EOF for STRING in $STRINGS[*];do#fit stretching and(z) position of given string set_variable DETECTOR_TMP ${TMPDIR:-/tmp}/detector_A.datx JEditDetector-a $DETECTOR-o $DETECTOR_TMP-r $STRING JEditDetector-a $DETECTOR-o $DETECTOR-k $STRING for MUL in 0.005 0.001;do DX_M=0.2 for((N=0;$N< $NUMBER_OF_ITERATIONS;++N));do CHI2[3]=$CHI2[1] fitPositionOfString $STRING Z $DX_M fitStretchingOfString $STRING $MUL if(($CHI2[3]-$CHI2[1]< $EPSILON));then break fi done if(($N >=$NUMBER_OF_ITERATIONS));then printf"warning: reached maximum number of iterations %d - converenge %7.3f\n"$N $(($CHI2[3]-$CHI2[1])) fi done JMergeDetector-a $DETECTOR-a $DETECTOR_TMP-o $DETECTOR rm-f $DETECTOR_TMP JConvertDetectorFormat-a $DETECTOR-o $DETECTOR-r-d 0 > &dev null done
Definition: acoustics-fit.sh:563
WORKDIR
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR &dev null set_variable DEBUG set_variable WORKDIR
Definition: JLegolas.sh:20
F
then awk F
Definition: getMIIseacurrent.sh:86
usage
* usage
Definition: JLigier-local.sh:34
o
then JConvertDetectorFormat a $DETECTOR[1] o
Definition: JCompareDetector.sh:45
FORMULA
&set_variable FORMULA
Definition: JEvtReweightMupageParameterScan.sh:54
p2
p2
Definition: module-Z:fit.sh:74
d
then JMuonMCEvt f $INPUT_FILE o $INTERMEDIATE_FILE d
Definition: JMuonPath.sh:47
a
then JCalibrateToT a
Definition: JTuneHV.sh:116
$DETECTOR
then set_variable MODULE getModule a $DETECTOR L $STRING $FLOOR JEditDetector a $DETECTOR M $MODULE add $X o $DETECTOR else echo No update of detector $DETECTOR
Definition: module-Z:fit.sh:118
modulez_
do typeset Z STRING typeset Z FLOOR set_variable MODULE_TXT $WORKDIR modulez_
Definition: module-Z:fit.sh:35
DEBUG
then usage $script< input_file >< detector_file > fi set_variable OUTPUT_DIR set_variable SELECTOR JDAQTimesliceL1 set_variable DEBUG case set_variable DEBUG
Definition: JCalibratePMT.sh:21
$WORKDIR
then display $WORKDIR
Definition: plot-Domino.sh:128
Z
do set_variable MODULE getModule a $WORKDIR detector_a datx L $STRING JEditDetector a $WORKDIR detector_a datx M $MODULE setz o $WORKDIR detector_a datx JEditDetector a $WORKDIR detector_b datx M $MODULE setz o $WORKDIR detector_b datx done echo Output stored at $WORKDIR detector_a datx and $WORKDIR tripod_a txt JDrawDetector2D a $WORKDIR detector_a datx a $WORKDIR detector_b datx L BL o detector $FORMAT $BATCH JDrawDetector2D T $WORKDIR tripod_a txt T $WORKDIR tripod_b txt L BL o tripod $FORMAT $BATCH JCompareDetector a $WORKDIR detector_a datx b $WORKDIR detector_b datx o $WORKDIR abc root &dev null for KEY in X Y Z
Definition: JAlignDetector.sh:81
XMIN
then let XMIN
Definition: detector-XY:fit.sh:67
DETECTOR
set_variable DETECTOR
Definition: JARCACalibrateMuon.sh:31
JTOOLS::v
data_type v[N+1][M+1]
Definition: JPolint.hh:756
script
script
Definition: JAcoustics.sh:2
$G1_TXT
do typeset Z STRING typeset Z FLOOR set_variable MODULE_TXT $WORKDIR $MODULE_TXT tail read X ZMAX RMS sort gr $MODULE_TXT tail read X ZMIN RMS echo $X $ZMIN $G1_TXT
Definition: module-Z:fit.sh:35
null
esac $JPP_BIN JLogger sh $LOGGER until pgrep JGetMessage</dev/null > dev null
Definition: examples/JLogger/JLogger.sh:33
getModule
const JModule & getModule(const JDetector &detector, const JModuleLocation &location)
find module with a given string and floor number
Definition: JBeaconSimulator.cc:928
g1
Double_t g1(const Double_t x)
Function.
Definition: JQuantiles.cc:25
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