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hydrophone-t0:fit.sh
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1 #!/bin/zsh
2 script=${0##*/}
3 
4 if [ -z $JPP_DIR ]; then
5  echo "Variable JPP_DIR undefined."
6  exit
7 fi
8 
9 source $JPP_DIR/setenv.sh $JPP_DIR >& /dev/null
10 
11 zmodload zsh/mathfunc
12 
13 set_variable: DEBUG ACOUSTICS_DEBUG 2
14 set_variable: WORKDIR ACOUSTICS_WORKDIR ./
15 set_variable: XMIN HYDROPHONE_XMIN -1.0e-3
16 set_variable: XMAX HYDROPHONE_XMAX +1.0e-3
17 set_variable: FORMAT GRAPHICS_FORMAT gif
18 set_variable+ BATCH GRAPHICS_BATCH -B
19 
20 if do_usage $*; then
21  usage "$script <detector file> <string identifier> [<detector file>]"
22 fi
23 
24 if (( $# == 0 || $# > 3 )); then
25  fatal "Wrong number of arguments."
26 fi
27 
28 set_variable DETECTOR $argv[1]
29 set_variable STRING $argv[2]
30 set_array QUANTILES 0.333 0.666
31 set_variable FORMULA "[0] * exp(-0.5 * (x-[1])*(x-[1]) / ([2]*[2]))"
32 set_variable MODULE `getModule -a $DETECTOR -L "$STRING 0"`
33 
34 source JAcoustics.sh --
35 
36 typeset -A TRIPODS
37 
38 get_tripods $WORKDIR/tripod.txt TRIPODS
39 
40 XMEAN=(0.0 0.0)
41 STDEV=(0.0 0.0)
42 TOTAL=0.0
43 
44 for TRIPOD in ${(k)TRIPODS[*]}; do
45 
46  JPrintQuantiles \
47  -f "hydrophone.root:${MODULE}.${TRIPOD}" \
48  -Q "$QUANTILES[*]" \
49  -d 0 | read -A RESULT
50 
51  if (( ${#RESULT} == ${#QUANTILES} )); then
52 
53  P1=$((0.5*($RESULT[-1] + $RESULT[1]))) # average
54  P2=$((0.5*($RESULT[-1] - $RESULT[1]))) # width
55 
56  JFit \
57  -f "hydrophone.root:${MODULE}.${TRIPOD}" \
58  -o ${TMPDIR:-/tmp}/fit.root \
59  -F "$FORMULA" \
60  -@"p0 = GetMaximum * 0.8" \
61  -@"p1 = $P1" \
62  -@"p2 = $P2" \
63  -d 0 >& /dev/null
64 
65  JPrintFit -f ${TMPDIR:-/tmp}/fit.root:\.\* -@p1 | read -A P1
66  JPrintFit -f ${TMPDIR:-/tmp}/fit.root:\.\* -@p2 | read -A P2
67 
68  VALUE=$((1.0e+6 * $P1[1])) # [us]
69  TOTAL=$(($TOTAL + 1.0))
70 
71  if (( $TOTAL == 1.0 )); then
72  XMEAN[1]=$VALUE
73  STDEV[1]=0.0
74  else
75  XMEAN[2]=$(($XMEAN[1] + ($VALUE - $XMEAN[1]) / $TOTAL))
76  STDEV[2]=$(($STDEV[1] + ($VALUE - $XMEAN[1]) * ($VALUE - $XMEAN[2])))
77  XMEAN[1]=$XMEAN[2]
78  STDEV[1]=$STDEV[2]
79  fi
80 
81  printf "string %4d tripod %2d %5.0f %3.0f us\n" $STRING $TRIPOD $(($P1[1] * 1.0e6)) $(($P2[1] * 1.0e6))
82  fi
83 done
84 
85 if (( $TOTAL > 1.0 )); then
86  printf "string %4d mean RMS %5.0f %3.0f us\n" $STRING $XMEAN[1] $((sqrt($TOTAL * $STDEV[1] / ($TOTAL * ($TOTAL - 1.0)))))
87 fi
88 
89 typeset -Z 4 STRING
90 
91 JOpera1D \
92  -f hydrophone.root:$MODULE \
93  -o ${TMPDIR:-/tmp}/H\[${STRING}\].root \
94  -u Add -d 0
95 
96 JPrintQuantiles \
97  -f ${TMPDIR:-/tmp}/H\[${STRING}\].root:Add \
98  -Q "$QUANTILES[*]" \
99  -d 0 | read -A RESULT
100 
101 P1=$((0.5*($RESULT[-1] + $RESULT[1]))) # average
102 P2=$((0.5*($RESULT[-1] - $RESULT[1]))) # width
103 
104 JFit \
105  -f ${TMPDIR:-/tmp}/H\[${STRING}\].root:Add \
106  -o ${TMPDIR:-/tmp}/F\[${STRING}\].root \
107  -F "$FORMULA" \
108  -@"p0 = GetMaximum * 0.8" \
109  -@"p1 = $P1" \
110  -@"p2 = $P2" \
111  -d $DEBUG
112 
113 JPrintFit -f ${TMPDIR:-/tmp}/F\[${STRING}\].root:Add -@p1 | read -A P1
114 JPrintFit -f ${TMPDIR:-/tmp}/F\[${STRING}\].root:Add -@p2 | read -A P2
115 
116 printf "string %4d t0 %6.0f +/- %6.0f us\n" $STRING $(($P1[1] * 1.0e6)) $(($P1[2] * 1.0e6))
117 printf "string %4d sigma %6.0f +/- %6.0f us\n" $STRING $(($P2[1] * 1.0e6)) $(($P2[2] * 1.0e6))
118 
119 if (( ${#} == 3 )); then
120 
121  set_variable DETECTOR $argv[3]
122 
123  set_array P1 `JPrintFit -f ${TMPDIR:-/tmp}/F\[${STRING}\].root:Add -@p1`
124 
125  let TIME_OFFSET_NS="$P1[1] * 1.0e9"
126 
127  printf "Add time offset %12.6d to hydrophone.\n" $TIME_OFFSET_NS
128 
129  JEditDetector \
130  -a $DETECTOR \
131  -o $DETECTOR \
132  -M "$MODULE SUB $TIME_OFFSET_NS" \
133  -d $DEBUG
134 fi
135 
136 JPlot1D \
137  -f ${TMPDIR:-/tmp}/F\[${STRING}\].root:Add \
138  -x "$XMIN $XMAX" \
139  -\> "#Deltat [s]" \
140  -\^ "number of events [a.u.]" \
141  -N "X 505" \
142  -T "$STRING" \
143  -o hydrophonet0_${STRING}.$FORMAT $BATCH
k
then fatal No hydrophone data file $HYDROPHONE_TXT fi sort gr k
Definition: hydrophone-phi:fit.sh:35
Q
Q(UTCMax_s-UTCMin_s)-livetime_s
p1
TPaveText * p1
Definition: JDrawModule3D.cc:35
M
do $JPP JMEstimator M
Definition: JMEstimator.sh:37
$argv
*set_variable DETECTOR_ID $argv[1] set_array RUNS $argv[2,-2]
Definition: JDataQuality.sh:24
JCOMPAREHISTOGRAMS::read
std::istream & read(std::istream &in, JTestSummary &summary, const char delimiter= ' ')
Read test summary.
Definition: JTestSummary.hh:222
STRING
clean eval JPrintDetector a $DETECTOR O IDENTIFIER eval JPrintDetector a $DETECTOR O SUMMARY set_variable STRING
Definition: examples/JTrigger/JTriggerEfficiencyRunByRun.sh:64
f
o $QUALITY_ROOT d $DEBUG!JPlot1D f
Definition: JDataQuality.sh:66
N
then JShowerPostfit f $INPUT_FILE o $OUTPUT_FILE N
Definition: JShowerPostfit.sh:95
JPHYSICS::H
static const double H
Planck constant [eV s].
Definition: JPhysics/JConstants.hh:28
exit
exit
Definition: JPizza.sh:36
echo
then echo
Definition: JDOMDAQDriver.sh:56
$STRING
then fatal Invalid string $STRING
Definition: detector-XY:run.sh:35
set_variable
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR &dev null set_variable
Definition: JAcoustics.sh:20
TMPDIR
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR if do_usage *then usage $script[(input file)+] fi set_variable DEBUG set_variable WORKDIR TMPDIR
Definition: JEnergyCorrection.sh:21
T
do set_variable OUTPUT_DIRECTORY $WORKDIR T
Definition: JCalibrateHeight.sh:61
TRIPOD
&set_variable TRIPOD
Definition: acoustics-fit_00000094.sh:33
done
set_variable NUMBER_OF_ITERATIONS set_variable EPSILON cat acoustics_fit_parameters txt<< EOF $CONFIGURATION[*]Nmin=3;sigma_s=100.0e-6;stdev=10.0;mestimator=0;fixStrings=0;EOF for STRING in $STRINGS[*];do#fit stretching and(z) position of given string set_variable DETECTOR_TMP ${TMPDIR:-/tmp}/detector_A.datx JEditDetector-a $DETECTOR-o $DETECTOR_TMP-r $STRING JEditDetector-a $DETECTOR-o $DETECTOR-k $STRING for MUL in 0.005 0.001;do DX_M=0.2 for((N=0;$N< $NUMBER_OF_ITERATIONS;++N));do CHI2[3]=$CHI2[1] fitPositionOfString $STRING Z $DX_M fitStretchingOfString $STRING $MUL if(($CHI2[3]-$CHI2[1]< $EPSILON));then break fi done if(($N >=$NUMBER_OF_ITERATIONS));then printf"warning: reached maximum number of iterations %d - converenge %7.3f\n"$N $(($CHI2[3]-$CHI2[1])) fi done JMergeDetector-a $DETECTOR-a $DETECTOR_TMP-o $DETECTOR rm-f $DETECTOR_TMP JConvertDetectorFormat-a $DETECTOR-o $DETECTOR-r-d 0 > &dev null done
Definition: acoustics-fit.sh:563
WORKDIR
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR &dev null set_variable DEBUG set_variable WORKDIR
Definition: JLegolas.sh:20
F
then awk F
Definition: getMIIseacurrent.sh:86
usage
* usage
Definition: JLigier-local.sh:34
o
then JConvertDetectorFormat a $DETECTOR[1] o
Definition: JCompareDetector.sh:45
FORMULA
&set_variable FORMULA
Definition: JEvtReweightMupageParameterScan.sh:54
p2
p2
Definition: module-Z:fit.sh:74
XMEAN
then XMEAN[1]
Definition: hydrophone-t0:fit.sh:72
root
do JPlot2D f $WORKDIR detector root
Definition: JCompareDetector.sh:95
d
then JMuonMCEvt f $INPUT_FILE o $INTERMEDIATE_FILE d
Definition: JMuonPath.sh:47
P1
then P1
Definition: hydrophone-t0:fit.sh:53
a
then JCalibrateToT a
Definition: JTuneHV.sh:116
$DETECTOR
then set_variable MODULE getModule a $DETECTOR L $STRING $FLOOR JEditDetector a $DETECTOR M $MODULE add $X o $DETECTOR else echo No update of detector $DETECTOR
Definition: module-Z:fit.sh:118
DEBUG
then usage $script< input_file >< detector_file > fi set_variable OUTPUT_DIR set_variable SELECTOR JDAQTimesliceL1 set_variable DEBUG case set_variable DEBUG
Definition: JCalibratePMT.sh:21
$WORKDIR
then display $WORKDIR
Definition: plot-Domino.sh:128
Z
do set_variable MODULE getModule a $WORKDIR detector_a datx L $STRING JEditDetector a $WORKDIR detector_a datx M $MODULE setz o $WORKDIR detector_a datx JEditDetector a $WORKDIR detector_b datx M $MODULE setz o $WORKDIR detector_b datx done echo Output stored at $WORKDIR detector_a datx and $WORKDIR tripod_a txt JDrawDetector2D a $WORKDIR detector_a datx a $WORKDIR detector_b datx L BL o detector $FORMAT $BATCH JDrawDetector2D T $WORKDIR tripod_a txt T $WORKDIR tripod_b txt L BL o tripod $FORMAT $BATCH JCompareDetector a $WORKDIR detector_a datx b $WORKDIR detector_b datx o $WORKDIR abc root &dev null for KEY in X Y Z
Definition: JAlignDetector.sh:81
XMIN
then let XMIN
Definition: detector-XY:fit.sh:67
$XMEAN
then printf string mean RMS us n $STRING $XMEAN((sqrt($TOTAL *$STDEV[1]/($TOTAL *($TOTAL-1.0))))) fi typeset-Z 4 STRING JOpera1D-f hydrophone.root
Definition: hydrophone-t0:fit.sh:86
DETECTOR
set_variable DETECTOR
Definition: JARCACalibrateMuon.sh:31
JTOOLS::u
double u[N+1]
Definition: JPolint.hh:755
in
then fatal Wrong number of arguments fi set_variable DETECTOR $argv[1] set_variable INPUT_FILE $argv[2] eval JPrintDetector a $DETECTOR O IDENTIFIER eval JPrintDetector a $DETECTOR O SUMMARY source JAcoustics sh $DETECTOR_ID CHECK_EXIT_CODE typeset A TRIPODS get_tripods $WORKDIR tripod txt TRIPODS for EMITTER in
Definition: JCanberra.sh:42
A
source $JPP_DIR setenv csh $JPP_DIR &dev null eval JShellParser o a A
Definition: JShellParser.csh:15
script
script
Definition: JAcoustics.sh:2
$TRIPOD
then fatal Invalid tripod $TRIPOD
Definition: tripod-XY:run.sh:38
null
esac $JPP_BIN JLogger sh $LOGGER until pgrep JGetMessage</dev/null > dev null
Definition: examples/JLogger/JLogger.sh:33
getModule
const JModule & getModule(const JDetector &detector, const JModuleLocation &location)
find module with a given string and floor number
Definition: JBeaconSimulator.cc:928
QUANTILES
then QUANTILES
Definition: JShowerPostfit.sh:129
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