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JARCAEnergyCorrection.sh
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1 #!/bin/zsh
2 #
3 # \author mdejong
4 #
5 version=1.0
6 script=${0##*/}
7 
8 # ------------------------------------------------------------------------------------------
9 #
10 # Utility script to determine muon energy correction base on Monte Carlo simulations.
11 #
12 # ------------------------------------------------------------------------------------------
13 
14 if [ -z $JPP_DIR ]; then
15  echo "Variable JPP_DIR undefined."
16  exit
17 fi
18 
19 source $JPP_DIR/setenv.sh $JPP_DIR
20 
21 zmodload zsh/mathfunc
22 
23 set_variable DEBUG 2
24 set_variable WORKDIR ${TMPDIR:-/tmp}/
25 set_variable NUMBER_OF_RUNS 10
26 set_variable NUMBER_OF_BINS 40
27 set_variable RANGE_LOGE 3.0 6.5
28 set_variable: FORMAT GRAPHICS_FORMAT gif
29 set_variable+ BATCH GRAPHICS_BATCH -B
30 
31 if do_usage $*; then
32  usage "$script <working directory> <option>"\
33  "\nPossible options: run fit interpolate"
34 fi
35 
36 if (( $# != 2 )); then
37  fatal "Wrong number of arguments."
38 fi
39 
40 set_variable WORKDIR $argv[1]
41 set_variable OPTION $argv[2]
42 
43 if [[ $OPTION != "run" && $OPTION != "fit" && $OPTION != "interpolate" ]]; then
44  fatal "Invalid option $OPTION."
45 fi
46 
47 mkdir -p $WORKDIR
48 
49 if [[ $OPTION == "run" ]]; then
50 
51  set_variable DETECTOR $WORKDIR/detector.detx
52 
53  if [[ ! -f $DETECTOR ]]; then
54  JDetector.sh $DETECTOR
55  fi
56 
57  for (( i = 1; $i <= $NUMBER_OF_RUNS; ++i )); do
58  JSirene.sh $DETECTOR $JPP_DATA/genhen.km3net_wpd_V2_0.evt.gz $WORKDIR/sirene_${i}.root
59  JTriggerEfficiency.sh $DETECTOR $DETECTOR $WORKDIR/sirene_${i}.root $WORKDIR/trigger_efficiency_${i}.root
60  JARCAMuonReconstruction.sh $DETECTOR $WORKDIR/trigger_efficiency_${i}.root $WORKDIR/%_${i}.root $JPP_DATA/PMT_parameters.txt
61  done
62 fi
63 
64 if [[ $OPTION == "fit" || $OPTION == "interpolate" ]]; then
65 
66  if ( ! reuse_file $WORKDIR/energy_correction.root ); then
67 
68  set_array INPUT_FILES `ls $WORKDIR/jchain.arca_*.root`
69 
70  if (( ${#INPUT_FILES} == 0 )); then
71  fatal "No input file in directory $WORKDIR"
72  fi
73 
74  else
75 
76  set_array INPUT_FILES `ls $WORKDIR/energy_correction.root`
77  fi
78 
79  if [[ $OPTION == "fit" ]]; then
80 
81  JEnergyCorrection \
82  -f "$INPUT_FILES[*]" \
83  -o $WORKDIR/energy_correction.root \
84  -F "[0] + [1]*x + [2]*x*x + [3]*x*x*x" \
85  -@ "p0 = 0.0" \
86  -@ "p1 = 1.0" \
87  -@ "p2 = 0.0" \
88  -@ "p3 = 0.0" \
89  -N $NUMBER_OF_BINS \
90  -x "$RANGE_LOGE" \
91  -d $DEBUG --!
92 
93  elif [[ $OPTION == "interpolate" ]]; then
94 
95  JEnergyCorrection \
96  -f "$INPUT_FILES[*]" \
97  -o $WORKDIR/energy_correction.root \
98  -N $NUMBER_OF_BINS \
99  -x "$RANGE_LOGE" \
100  -d $DEBUG --!
101  fi
102 
103  JPlot2D \
104  -f $WORKDIR/energy_correction.root:h2 \
105  -\> "E_{fit} [GeV]" \
106  -\< "E_{true} [GeV]" \
107  -XX \
108  -YY \
109  -Z \
110  -O COLZ \
111  -T "" \
112  -o ExE.$FORMAT $BATCH
113 
114  set_variable YMIN 0
115  set_variable YMAX `JPrintResult -f $WORKDIR/energy_correction.root:h1 -F "GetMaximum + 0.5"`
116 
117  JPlot1D \
118  -f $WORKDIR/energy_correction.root:h1 \
119  -y "$YMIN $YMAX" \
120  -\> "log(E_{fit}/GeV)" \
121  -\^ "log(E_{true}/GeV)" \
122  -T "" \
123  -o E.$FORMAT $BATCH
124 
125  echo result stored in $WORKDIR/energy_correction.root
126 fi
OPTION
then usage $script< detector >< run >< outputfile > fi case set_variable OPTION
Definition: JTuna.sh:26
$argv
*set_variable DETECTOR_ID $argv[1] set_array RUNS $argv[2,-2]
Definition: JDataQuality.sh:24
E
then usage E
Definition: JMuonPostfit.sh:35
f
o $QUALITY_ROOT d $DEBUG!JPlot1D f
Definition: JDataQuality.sh:66
N
then JShowerPostfit f $INPUT_FILE o $OUTPUT_FILE N
Definition: JShowerPostfit.sh:95
exit
exit
Definition: JPizza.sh:36
h1
then for HISTOGRAM in h0 h1
Definition: JMatrixNZ.sh:71
YY
set_variable LOGY YY
Definition: JMuonPostfit.sh:73
YMIN
fatal Invalid number of arguments esac let YMIN
Definition: testToT.sh:39
echo
then echo
Definition: JDOMDAQDriver.sh:56
set_variable
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR &dev null set_variable
Definition: JAcoustics.sh:20
TMPDIR
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR if do_usage *then usage $script[(input file)+] fi set_variable DEBUG set_variable WORKDIR TMPDIR
Definition: JEnergyCorrection.sh:21
JTOOLS::result
return result
Definition: JPolint.hh:743
T
do set_variable OUTPUT_DIRECTORY $WORKDIR T
Definition: JCalibrateHeight.sh:61
done
set_variable NUMBER_OF_ITERATIONS set_variable EPSILON cat acoustics_fit_parameters txt<< EOF $CONFIGURATION[*]Nmin=3;sigma_s=100.0e-6;stdev=10.0;mestimator=0;fixStrings=0;EOF for STRING in $STRINGS[*];do#fit stretching and(z) position of given string set_variable DETECTOR_TMP ${TMPDIR:-/tmp}/detector_A.datx JEditDetector-a $DETECTOR-o $DETECTOR_TMP-r $STRING JEditDetector-a $DETECTOR-o $DETECTOR-k $STRING for MUL in 0.005 0.001;do DX_M=0.2 for((N=0;$N< $NUMBER_OF_ITERATIONS;++N));do CHI2[3]=$CHI2[1] fitPositionOfString $STRING Z $DX_M fitStretchingOfString $STRING $MUL if(($CHI2[3]-$CHI2[1]< $EPSILON));then break fi done if(($N >=$NUMBER_OF_ITERATIONS));then printf"warning: reached maximum number of iterations %d - converenge %7.3f\n"$N $(($CHI2[3]-$CHI2[1])) fi done JMergeDetector-a $DETECTOR-a $DETECTOR_TMP-o $DETECTOR rm-f $DETECTOR_TMP JConvertDetectorFormat-a $DETECTOR-o $DETECTOR-r-d 0 > &dev null done
Definition: acoustics-fit.sh:563
WORKDIR
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR &dev null set_variable DEBUG set_variable WORKDIR
Definition: JLegolas.sh:20
F
then awk F
Definition: getMIIseacurrent.sh:86
usage
* usage
Definition: JLigier-local.sh:34
XX
set_variable LOG XX
Definition: JMuonPostfit.sh:71
o
then JConvertDetectorFormat a $DETECTOR[1] o
Definition: JCompareDetector.sh:45
elif
skip elif((BINFRAC< 1.0))
sirene_
do JSirene sh $DETECTOR $JPP_DATA genhen km3net_wpd_V2_0 evt gz $WORKDIR sirene_
Definition: JARCAEnergyCorrection.sh:58
INPUT_FILES
do sput $STRING $FLOOR sget MODULE INPUT_FILES
Definition: JCanberra.sh:73
d
then JMuonMCEvt f $INPUT_FILE o $INTERMEDIATE_FILE d
Definition: JMuonPath.sh:47
$DETECTOR
then set_variable MODULE getModule a $DETECTOR L $STRING $FLOOR JEditDetector a $DETECTOR M $MODULE add $X o $DETECTOR else echo No update of detector $DETECTOR
Definition: module-Z:fit.sh:118
DEBUG
then usage $script< input_file >< detector_file > fi set_variable OUTPUT_DIR set_variable SELECTOR JDAQTimesliceL1 set_variable DEBUG case set_variable DEBUG
Definition: JCalibratePMT.sh:21
$WORKDIR
then display $WORKDIR
Definition: plot-Domino.sh:128
Z
do set_variable MODULE getModule a $WORKDIR detector_a datx L $STRING JEditDetector a $WORKDIR detector_a datx M $MODULE setz o $WORKDIR detector_a datx JEditDetector a $WORKDIR detector_b datx M $MODULE setz o $WORKDIR detector_b datx done echo Output stored at $WORKDIR detector_a datx and $WORKDIR tripod_a txt JDrawDetector2D a $WORKDIR detector_a datx a $WORKDIR detector_b datx L BL o detector $FORMAT $BATCH JDrawDetector2D T $WORKDIR tripod_a txt T $WORKDIR tripod_b txt L BL o tripod $FORMAT $BATCH JCompareDetector a $WORKDIR detector_a datx b $WORKDIR detector_b datx o $WORKDIR abc root &dev null for KEY in X Y Z
Definition: JAlignDetector.sh:81
DETECTOR
set_variable DETECTOR
Definition: JARCACalibrateMuon.sh:31
detector
do set_variable DETECTOR_TXT $WORKDIR detector
Definition: detector-XY:fit1d.sh:38
in
then fatal Wrong number of arguments fi set_variable DETECTOR $argv[1] set_variable INPUT_FILE $argv[2] eval JPrintDetector a $DETECTOR O IDENTIFIER eval JPrintDetector a $DETECTOR O SUMMARY source JAcoustics sh $DETECTOR_ID CHECK_EXIT_CODE typeset A TRIPODS get_tripods $WORKDIR tripod txt TRIPODS for EMITTER in
Definition: JCanberra.sh:42
version
version
Definition: JCalibratePMT.sh:7
$OPTION
*fatal Wrong option $OPTION
Definition: getMIIseacurrent.sh:66
$i
do alias $i
Definition: JDOMDAQDriver.sh:23
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