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software/JAcoustics/plot-canberra.sh
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1 #!/bin/zsh
2 script=${0##*/}
3 
4 if [ -z $JPP_DIR ]; then
5  echo "Variable JPP_DIR undefined."
6  exit
7 fi
8 
9 source $JPP_DIR/setenv.sh $JPP_DIR >& /dev/null
10 
11 set_variable: DEBUG ACOUSTICS_DEBUG 2
12 set_variable: WORKDIR ACOUSTICS_WORKDIR ./
13 set_variable: XMIN CANBERRA_XMIN -1.0e-3
14 set_variable: XMAX CANBERRA_XMAX +1.0e-3
15 set_variable: ZMIN CANBERRA_ZMIN -0.5
16 set_variable: ZMAX CANBERRA_ZMAX +0.5
17 set_variable+ DISABLE CANBERRA_DISABLE -! $WORKDIR/disable.txt
18 set_variable+ REVERT CANBERRA_REVERT -r
19 set_variable: OPTION CANBERRA_OPTION -O HIST
20 set_variable: FORMAT GRAPHICS_FORMAT gif
21 set_variable+ BATCH GRAPHICS_BATCH -B
22 
23 if do_usage $*; then
24  usage "$script <detector file> (input file)+"\
25  "\nInput file corresponds to the output of JKatoomba[.sh]."
26 fi
27 
28 if (( $# < 2 )); then
29  fatal "Wrong number of arguments."
30 fi
31 
33 set_array INPUT_FILES $argv[2,-1]
34 
35 eval `JPrintDetector -a $DETECTOR -O IDENTIFIER`
36 eval `JPrintDetector -a $DETECTOR -O SUMMARY`
37 
38 JAcoustics.sh $DETECTOR_ID
39 
40 JCanberra.sh $DETECTOR $INPUT_FILES[*] $WORKDIR/canberra\[%\].root
41 
42 source JAcousticsToolkit.sh
43 
44 CHECK_EXIT_CODE
45 
46 typeset -A EMITTERS
47 
48 get_tripods+ $WORKDIR/tripod.txt EMITTERS
49 get_transmitters+ $WORKDIR/transmitter.txt EMITTERS
50 
51 kill_child_processes_at_exit
52 
53 attach getModule -a $DETECTOR
54 
55 typeset -Z 4 STRING
56 typeset -Z 2 FLOOR
57 
58 for STRING in $STRINGS[*]; do
59 
60  echo -n "Creating graphics for string $STRING.."
61 
62  for (( FLOOR = $FIRST_FLOOR; $FLOOR <= $LAST_FLOOR; FLOOR += 1 )); do
63 
64  sput $STRING $FLOOR
65  sget MODULE
66 
67  INPUT_FILES=(`ls $WORKDIR/canberra\[*\].root`)
68 
69  JPlot1D \
70  -f${^INPUT_FILES}:${MODULE} \
71  -\> "#Deltat [s]" \
72  -\^ "number of events [a.u.]" \
73  -x "$XMIN $XMAX" \
74  $OPTION \
75  -N "X 505" \
76  -L TR \
77  -T "(${STRING},${FLOOR})" \
78  -o ${TMPDIR:-/tmp}/toa_${STRING}_${FLOOR}.$FORMAT $BATCH
79  done
80 
81  montage \
82  -tile 6x3 \
83  -geometry +0+0 \
84  ${TMPDIR:-/tmp}/toa_${STRING}_{01..18}.$FORMAT \ $WORKDIR/toa_${STRING}${REVERT}.$FORMAT >& /dev/null
85 
86  mv ${TMPDIR:-/tmp}/toa_${STRING}_00.$FORMAT \ $WORKDIR/toa_${STRING}_00${REVERT}.$FORMAT
87 
88  echo " -> $WORKDIR/toa_${STRING}${REVERT}.$FORMAT"
89 
90  rm -f ${TMPDIR:-/tmp}/toa_${STRING}_*.$FORMAT
91 done
92 
93 detach
94 
95 for EMITTER in ${(@k)EMITTERS}; do
96 
97  JPlot2D \
98  -f $WORKDIR/canberra\[${EMITTER}\].root:mean \
99  -\> "string" \
100  -\< "floor" \
101  -\^ "#Deltat [ms]" \
102  -z "$ZMIN $ZMAX" \
103  -N "Y 10" \
104  -T "[${EMITTER}]" \
105  -O COLZ \
106  -p 57 \
107  -o $WORKDIR/mean_${EMITTER}${REVERT}.$FORMAT $BATCH
108 
109  JPlot2D \
110  -f $WORKDIR/canberra\[${EMITTER}\].root:sigma \
111  -\> "string" \
112  -\< "floor" \
113  -\^ "#sigma [ms]" \
114  -z "0.0 0.1" \
115  -N "Y 10" \
116  -T "[${EMITTER}]" \
117  -O COLZ \
118  -p 57 \
119  -o $WORKDIR/sigma_${EMITTER}${REVERT}.$FORMAT $BATCH
120 done
121 
122 for KEY in mean sigma; do
123 
124  montage \
125  -tile ${NX}x${NY} \
126  -geometry +0+0 \
127  $WORKDIR/${KEY}_*${REVERT}.$FORMAT \ $WORKDIR/${KEY}${REVERT}.$FORMAT >& /dev/null
128 done
129 
130 
131 rm -f $WORKDIR/canberra\[*\].root
132 
then usage $script< detector >< run >< outputfile > fi case set_variable OPTION
Definition: JTuna.sh:26
*fatal Wrong number of arguments esac source JAcousticsToolkit sh mkdir p $WORKDIR post calibration pushd $WORKDIR post calibration post calibration_D0ARCA021 sh $DIR popd set_variable DETECTOR $WORKDIR post calibration detector datx set_variable TRIPOD $WORKDIR post calibration tripod txt set_variable DETECTOR_INITIAL detector_initial datx expand_array RUNS mkdir p $HOMEDIR cd $HOMEDIR JDetectorDB D $DETECTOR_ID r $RUNS[1] V WW o $DETECTOR_INITIAL JEditDetector a $DETECTOR r o detector_tmp datx!eval JPrintDetector a $DETECTOR_INITIAL O SUMMARY
then usage $script< detector identifier >< startdate\"YYYY-MM-DDHH:MM:SS\"><finaldate\"YYYY-MM-DDHH:MM:SS\"><QA/QCfile> fi case set_variable QAQC_TXT $argv[4]
Definition: JDataMonitor.sh:24
then fatal No hydrophone data file $HYDROPHONE_TXT fi sort gr k
clean eval JPrintDetector a $DETECTOR O IDENTIFIER eval JPrintDetector a $DETECTOR O SUMMARY set_variable STRING
then usage eval JPrintDetector a $DETECTOR O IDENTIFIER eval JPrintDetector a $DETECTOR O SUMMARY JAcoustics sh $DETECTOR_ID JCanberra sh $DETECTOR $INPUT_FILES[*] $WORKDIR canberra[%\] root source JAcousticsToolkit sh CHECK_EXIT_CODE typeset A EMITTERS get_tripods $WORKDIR tripod txt EMITTERS get_transmitters $WORKDIR transmitter txt EMITTERS kill_child_processes_at_exit attach getModule a $DETECTOR typeset Z STRING typeset Z FLOOR for STRING in $STRINGS[*]
o $QUALITY_ROOT d $DEBUG!CHECK_EXIT_CODE JPlot1D f
Definition: JDataQuality.sh:76
exit
Definition: JPizza.sh:36
data_type r[M+1]
Definition: JPolint.hh:868
then
Definition: datalogs.sh:34
then fatal Wrong number of arguments fi JConvertDetectorFormat a o
const double sigma[]
Definition: JQuadrature.cc:74
const int n
Definition: JPolint.hh:786
then rm
Definition: sftpput.zsh:30
then fatal Invalid string $STRING
then JCalibrateToT a
Definition: JTuneHV.sh:107
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR if do_usage *then usage $script[(input file)+] fi set_variable DEBUG set_variable WORKDIR TMPDIR
do set_variable OUTPUT_DIRECTORY $WORKDIR T
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR set_variable DEBUG set_variable WORKDIR if do_usage *then usage for INPUT_FILE in $INPUT_FILES[*]
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR &dev null set_variable
then echo Variable JPP_DIR undefined exit fi source $JPP_DIR setenv sh $JPP_DIR &dev null set_variable DEBUG set_variable WORKDIR
Definition: JLegolas.sh:20
* usage
then usage $script< input file >[option[primary[working directory]]] nWhere option can be N
Definition: JMuonPostfit.sh:40
then fatal The output file must have the wildcard in the e g root fi eval JPrintDetector a $DETECTOR O IDENTIFIER eval JPrintDetector a $DETECTOR O SUMMARY JAcoustics sh $DETECTOR_ID source JAcousticsToolkit sh CHECK_EXIT_CODE typeset A EMITTERS get_tripods $WORKDIR tripod txt EMITTERS get_transmitters $WORKDIR transmitter txt EMITTERS for EMITTER in
Definition: JCanberra.sh:48
then set_variable MODULE getModule a $DETECTOR L $STRING $FLOOR JEditDetector a $DETECTOR M $MODULE add $X o $DETECTOR else echo No update of detector $DETECTOR
do sput $STRING $FLOOR sget MODULE INPUT_FILES
do set_variable MODULE getModule a $WORKDIR detector_a datx L $STRING JEditDetector a $WORKDIR detector_a datx M $MODULE setz o $WORKDIR detector_a datx JEditDetector a $WORKDIR detector_b datx M $MODULE setz o $WORKDIR detector_b datx done echo Output stored at $WORKDIR detector_a datx and $WORKDIR tripod_a txt JDrawDetector2D a $WORKDIR detector_a datx a $WORKDIR detector_b datx L BL o detector $FORMAT $BATCH JDrawDetector2D T $WORKDIR tripod_a txt T $WORKDIR tripod_b txt L BL o tripod $FORMAT $BATCH JCompareDetector a $WORKDIR detector_a datx b $WORKDIR detector_b datx o $WORKDIR abc root &dev null for KEY in X Y Z
then let XMIN
then eval ls $DIR $ID $TYPE _
Definition: getArchive.sh:108
set_variable DETECTOR
then echo
Definition: JQAQC.sh:92
source $JPP_DIR setenv csh $JPP_DIR &dev null eval JShellParser o a A
*fatal Wrong option $OPTION
then getFile sh $JPP_ARCHIVE $DETECTOR_ID $RUNS[1] $KEY $VERSION $WORKDIR
esac $JPP_BIN JLogger sh $LOGGER until pgrep JGetMessage</dev/null > dev null
const JModule & getModule(const JDetector &detector, const JModuleLocation &location)
find module with a given string and floor number
esac done
Definition: JAddHDE.sh:21
#define DEBUG(A)
Message macros.
Definition: JMessage.hh:62